G824967


Basic Information

Item Value
gene id G824967
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 59460350 ~ 59460837 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU938027
gactttatagtgtcccagaacttttttagtttgtgttgcaggaagctaATTTCTGCTTTAAAAAGCTAGCcatggcttttctaactgcctgtgtatattggtttctagcttccctgaaaagttgcatatcacgggggctgttcgatgctaatgcagaatgccataggatgtttttgtgttggttaagggcagtcaggtctggagagaaccaagggctatatctgttcctggttctaaatttcttgaatggggcatgcttatttaagatggtgaggaaggcatttaaaaaaaaataaccaggcatcctctactgacgggatgaaatcaatatccttccaggataccccggccaggtcgattagaatggCCTGCTCGCTgaggtgtttcagggagcgtttgacagtgatgagtggaggtcgtttgaccgctgacccattacggatgcaggcaatgaggcagtgatcgctgagatcttggttgaaaacagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU938027 True 488 lncRNA 0.45 1 59460350 59460837

Neighbor

gene id symbol gene type direction distance location
LOC110532532 LOC106572483 coding upstream 22393 59428518 ~ 59437957 (+)
LOC110532531 LOC106572482 coding upstream 66481 59386864 ~ 59393869 (+)
LOC110532530 LOC106572481 coding upstream 77941 59374974 ~ 59382411 (+)
LOC110532529 LOC106572479 coding upstream 124194 59323575 ~ 59336156 (+)
LOC110531223 LOC106567210 coding upstream 269454 59188485 ~ 59190896 (+)
LOC110532533 NA coding downstream 3400 59464237 ~ 59468766 (+)
LOC110532534 LOC106572504 coding downstream 17390 59478227 ~ 59480332 (+)
LOC118966188 LOC106572505 coding downstream 27206 59488041 ~ 59492053 (+)
LOC110532535 LOC106572485 coding downstream 45466 59506303 ~ 59520371 (+)
LOC110532537 LOC106572506 coding downstream 70519 59531356 ~ 59535832 (+)
G824934 NA non-coding upstream 47123 59412952 ~ 59413227 (+)
G824921 NA non-coding upstream 76948 59383098 ~ 59383402 (+)
G824858 NA non-coding upstream 158173 59301881 ~ 59302177 (+)
G824822 LOC106572477 non-coding upstream 160401 59237340 ~ 59299949 (+)
G825460 NA non-coding downstream 66409 59527246 ~ 59527490 (+)
G825466 NA non-coding downstream 69362 59530199 ~ 59530629 (+)
G824936 NA other upstream 45337 59414147 ~ 59415013 (+)
LOC118966079 NA other upstream 300154 59158581 ~ 59161748 (+)
ppdpfa LOC106572462 other upstream 432207 59025174 ~ 59028152 (+)
fkb1a fkb1a other upstream 603651 58854845 ~ 58856718 (+)
G825484 NA other downstream 137192 59598029 ~ 59598970 (+)
G825749 NA other downstream 549172 60010009 ~ 60010425 (+)
G826505 NA other downstream 985193 60446030 ~ 60446534 (+)
G826653 NA other downstream 1102243 60563080 ~ 60563397 (+)
G826751 NA other downstream 1200532 60661369 ~ 60661906 (+)

Expression


Co-expression Network