G827501



Basic Information


Item Value
gene id G827501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 60691683 ~ 60692284 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU940946
cctttagccgcaccctcatactactcctcctctgttccgcgggtgatgtggaggtaaacccaggccctgcatgtccccaggcaccctcatttgttgacttctgtgatcgaaaaagccttggtttcatgcatgtcaacatcagaagcctcctccctaagtttgttttactcactgctttagcacactctgccaaccctgatgtccttgccgtgtctgaatcctggcttaggtaGGCCatcaaaaattctgagatttccatacccaactataacattttccgtcaagatagaactgccaaagggggaggagttgcagtctactgcagagatagcctgcaaagtaatgtcatactttccaggtccatacccaaacagttcaaactactaattttaaaaatgactctctacagaaataagtccctcactgttgccgtctgctaccgacccccctcagctcccagctgtgccctggacaccatttgtgaattgatcgtcccacatctagcttcagagtttgttctgttaggtgacctaaactgggatatgattaacaccccggcagtcctacaatctaagctagatgccctcaatctcacacaaatc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU940946 True 602 lncRNA 0.47 1 60691683 60692284
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110532567 LOC106572513 coding downstream 415911 60227530 ~ 60275772 (-)
LOC118966189 NA coding downstream 552496 60129261 ~ 60139187 (-)
LOC110532562 LOC106572518 coding downstream 661173 60025979 ~ 60030510 (-)
LOC110532557 LOC106572522 coding downstream 703076 59978247 ~ 59988607 (-)
LOC110531227 LOC106572522 coding downstream 722597 59953127 ~ 59969086 (-)
LOC110532573 NA coding upstream 510928 61203212 ~ 61206086 (-)
LOC118966083 LOC106572544 coding upstream 522269 61214553 ~ 61237917 (-)
LOC110532574 LOC106572544 coding upstream 560410 61252694 ~ 61276113 (-)
LOC110532575 LOC106572544 coding upstream 594084 61286368 ~ 61305985 (-)
LOC110533028 LOC106572573 coding upstream 631274 61323558 ~ 61330431 (-)
G827499 NA non-coding downstream 725 60690750 ~ 60690958 (-)
G827492 NA non-coding downstream 9622 60681852 ~ 60682061 (-)
G827488 NA non-coding downstream 18358 60672917 ~ 60673325 (-)
G827476 NA non-coding downstream 54613 60636523 ~ 60637070 (-)
G826559 NA non-coding downstream 210667 60480774 ~ 60481016 (-)
G827504 LOC106567158 non-coding upstream 3687 60695971 ~ 60697254 (-)
G827520 NA non-coding upstream 37093 60729377 ~ 60729706 (-)
G827521 NA non-coding upstream 37857 60730141 ~ 60730349 (-)
G827522 NA non-coding upstream 38532 60730816 ~ 60731035 (-)
G827524 NA non-coding upstream 43975 60736259 ~ 60736534 (-)
G825961 NA other downstream 1052789 59638346 ~ 59638894 (-)
LOC118966080 LOC106572502 other downstream 1468202 59222442 ~ 59224300 (-)
LOC110531218 pqbp1 other downstream 2023598 58664782 ~ 58668085 (-)
G824405 NA other downstream 2250825 58440470 ~ 58440858 (-)
G827668 NA other upstream 336088 61028372 ~ 61072365 (-)
tmem269 pss other upstream 995484 61683104 ~ 61717981 (-)
G829644 NA other upstream 2098304 62790588 ~ 62792496 (-)
LOC110532632 LOC106572615 other upstream 3170564 63862848 ~ 63899379 (-)
G830543 LOC108255233 other upstream 3335623 64027907 ~ 64041211 (-)

Expression


G827501 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
End of interactive chart.

G827501 Expression in each Bioproject

Bar chart with 20 bars.
G827501 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network