G826865


Basic Information

Item Value
gene id G826865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 60843856 ~ 60844069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU940208
CTGGCTACTGTTAGTCTTTTCATCACTGCTGGATGGGAGAATTTGCTCAGCCTCAAAATAGGACTAGGAACCAATTGACCATCAGTCCAGATGCTCCTGGCTTAGCTCTGTTTGCATAGCAACCAGGTGAGGGAAACAaaagagaggcacacacacatgcaggtttTTCTCTTCTTCACTCGCTCTGCgctcacagtcacacactgaaCCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU940208 True 214 lncRNA 0.48 1 60843856 60844069

Neighbor

gene id symbol gene type direction distance location
LOC110531228 LOC106572534 coding upstream 540434 60288691 ~ 60304205 (+)
LOC110532568 LOC106572510 coding upstream 557778 60281781 ~ 60286078 (+)
LOC110532566 LOC106572511 coding upstream 615397 60144449 ~ 60228459 (+)
LOC110532564 LOC106572515 coding upstream 755854 60079288 ~ 60088002 (+)
LOC110532563 LOC106572516 coding upstream 765950 60065296 ~ 60077906 (+)
LOC110532569 LOC106572541 coding downstream 259698 61103767 ~ 61156703 (+)
ptpn22 LOC106572545 coding downstream 488035 61332104 ~ 61362738 (+)
si:ch73-206d17.1 LOC106572549 coding downstream 818184 61662253 ~ 61687521 (+)
trnaa-ugc-37 NA coding downstream 887025 61731094 ~ 61731167 (+)
LOC110531232 djc16 coding downstream 1093350 61937419 ~ 61942640 (+)
G826863 NA non-coding upstream 2838 60840778 ~ 60841018 (+)
G826857 NA non-coding upstream 10399 60832917 ~ 60833457 (+)
G826848 NA non-coding upstream 30709 60812926 ~ 60813147 (+)
G826833 NA non-coding upstream 47502 60796051 ~ 60796354 (+)
G826830 NA non-coding upstream 71749 60768951 ~ 60772107 (+)
G826867 NA non-coding downstream 1043 60845112 ~ 60845357 (+)
G826887 NA non-coding downstream 28969 60873038 ~ 60873271 (+)
G826897 NA non-coding downstream 45712 60889781 ~ 60890006 (+)
G826899 NA non-coding downstream 48766 60892835 ~ 60893444 (+)
G826901 NA non-coding downstream 53917 60897986 ~ 60898205 (+)
G826751 NA other upstream 181950 60661369 ~ 60661906 (+)
G826653 NA other upstream 280459 60563080 ~ 60563397 (+)
G826505 NA other upstream 397322 60446030 ~ 60446534 (+)
G825749 NA other upstream 833431 60010009 ~ 60010425 (+)
G825484 NA other upstream 1244886 59598029 ~ 59598970 (+)
G827039 NA other downstream 368392 61212461 ~ 61251238 (+)
G828274 NA other downstream 1345113 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 1779170 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 2721509 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 3470009 64314078 ~ 64316656 (+)

Expression


Co-expression Network