G826887


Basic Information

Item Value
gene id G826887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 60873038 ~ 60873271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU940230
TAATTTAACATTCAgtcttcagactaaacattactcagtcagttccaggttggatggcgttttcaggtttctgttgttttccataGCATTTGCTGTTTAGCGTTAGAATAATAATCTTTGGTAGTTGTAAGCcttccaggtgattccgtaattccgtccaaaatcagattgtaggttttgagttttgatttggagtgaaggttatgttgtagagggtagcatcctgtatatgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU940230 True 234 lncRNA 0.38 1 60873038 60873271

Neighbor

gene id symbol gene type direction distance location
LOC110531228 LOC106572534 coding upstream 569616 60288691 ~ 60304205 (+)
LOC110532568 LOC106572510 coding upstream 586960 60281781 ~ 60286078 (+)
LOC110532566 LOC106572511 coding upstream 644579 60144449 ~ 60228459 (+)
LOC110532564 LOC106572515 coding upstream 785036 60079288 ~ 60088002 (+)
LOC110532563 LOC106572516 coding upstream 795132 60065296 ~ 60077906 (+)
LOC110532569 LOC106572541 coding downstream 230496 61103767 ~ 61156703 (+)
ptpn22 LOC106572545 coding downstream 458833 61332104 ~ 61362738 (+)
si:ch73-206d17.1 LOC106572549 coding downstream 788982 61662253 ~ 61687521 (+)
trnaa-ugc-37 NA coding downstream 857823 61731094 ~ 61731167 (+)
LOC110531232 djc16 coding downstream 1064148 61937419 ~ 61942640 (+)
G826867 NA non-coding upstream 27681 60845112 ~ 60845357 (+)
G826865 NA non-coding upstream 28969 60843856 ~ 60844069 (+)
G826863 NA non-coding upstream 32020 60840778 ~ 60841018 (+)
G826857 NA non-coding upstream 39581 60832917 ~ 60833457 (+)
G826848 NA non-coding upstream 59891 60812926 ~ 60813147 (+)
G826897 NA non-coding downstream 16510 60889781 ~ 60890006 (+)
G826899 NA non-coding downstream 19564 60892835 ~ 60893444 (+)
G826901 NA non-coding downstream 24715 60897986 ~ 60898205 (+)
G826906 NA non-coding downstream 45883 60919154 ~ 60919361 (+)
G826907 NA non-coding downstream 49198 60922469 ~ 60922687 (+)
G826751 NA other upstream 211132 60661369 ~ 60661906 (+)
G826653 NA other upstream 309641 60563080 ~ 60563397 (+)
G826505 NA other upstream 426504 60446030 ~ 60446534 (+)
G825749 NA other upstream 862613 60010009 ~ 60010425 (+)
G825484 NA other upstream 1274068 59598029 ~ 59598970 (+)
G827039 NA other downstream 339190 61212461 ~ 61251238 (+)
G828274 NA other downstream 1315911 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 1749968 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 2692307 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 3440807 64314078 ~ 64316656 (+)

Expression


Co-expression Network