G826897


Basic Information

Item Value
gene id G826897
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 60889781 ~ 60890006 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU940241
GTACAAACCCACTCTGGACAATACATCaataatccctctctctctgtttctctctctttctttgtctttctctctgtctacatATCTCCATTTATGCCTGTGTTGTTtgtctgtctttgtttgtctctgtatgtgtttgtatacTCGCTGACACTGGCTTGGGTCTAGTAACATTATTACATTATCCGGGTCTCACTCCTAACCTCCTGACAGCTGTCTCCTCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU940241 True 226 lncRNA 0.42 1 60889781 60890006

Neighbor

gene id symbol gene type direction distance location
LOC110531228 LOC106572534 coding upstream 586359 60288691 ~ 60304205 (+)
LOC110532568 LOC106572510 coding upstream 603703 60281781 ~ 60286078 (+)
LOC110532566 LOC106572511 coding upstream 661322 60144449 ~ 60228459 (+)
LOC110532564 LOC106572515 coding upstream 801779 60079288 ~ 60088002 (+)
LOC110532563 LOC106572516 coding upstream 811875 60065296 ~ 60077906 (+)
LOC110532569 LOC106572541 coding downstream 213761 61103767 ~ 61156703 (+)
ptpn22 LOC106572545 coding downstream 442098 61332104 ~ 61362738 (+)
si:ch73-206d17.1 LOC106572549 coding downstream 772247 61662253 ~ 61687521 (+)
trnaa-ugc-37 NA coding downstream 841088 61731094 ~ 61731167 (+)
LOC110531232 djc16 coding downstream 1047413 61937419 ~ 61942640 (+)
G826887 NA non-coding upstream 16510 60873038 ~ 60873271 (+)
G826867 NA non-coding upstream 44424 60845112 ~ 60845357 (+)
G826865 NA non-coding upstream 45712 60843856 ~ 60844069 (+)
G826863 NA non-coding upstream 48763 60840778 ~ 60841018 (+)
G826857 NA non-coding upstream 56324 60832917 ~ 60833457 (+)
G826899 NA non-coding downstream 2829 60892835 ~ 60893444 (+)
G826901 NA non-coding downstream 7980 60897986 ~ 60898205 (+)
G826906 NA non-coding downstream 29148 60919154 ~ 60919361 (+)
G826907 NA non-coding downstream 32463 60922469 ~ 60922687 (+)
LOC110531229 LOC106572568 non-coding downstream 42281 60636523 ~ 61072400 (+)
G826751 NA other upstream 227875 60661369 ~ 60661906 (+)
G826653 NA other upstream 326384 60563080 ~ 60563397 (+)
G826505 NA other upstream 443247 60446030 ~ 60446534 (+)
G825749 NA other upstream 879356 60010009 ~ 60010425 (+)
G825484 NA other upstream 1290811 59598029 ~ 59598970 (+)
G827039 NA other downstream 322455 61212461 ~ 61251238 (+)
G828274 NA other downstream 1299176 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 1733233 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 2675572 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 3424072 64314078 ~ 64316656 (+)

Expression


Co-expression Network