G826906


Basic Information

Item Value
gene id G826906
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 60919154 ~ 60919361 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU940251
gtgtgtgtgtgtgtgtacatgtgtttacTTGTGTTTCATGTATCTTTTGTGTTCCTATGAACTGAAGAGGAAGACAAAAACACAAATAAAatgtgtctgttacagctggttaTTAGATAGAGTTTCCACCCACTCTTTAGTATGGTAGTGAAATACAGTAGCAACCAATTATCACAACGTAACAACACATTTTGCATTGCTCTTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU940251 True 208 lncRNA 0.36 1 60919154 60919361

Neighbor

gene id symbol gene type direction distance location
LOC110531228 LOC106572534 coding upstream 615732 60288691 ~ 60304205 (+)
LOC110532568 LOC106572510 coding upstream 633076 60281781 ~ 60286078 (+)
LOC110532566 LOC106572511 coding upstream 690695 60144449 ~ 60228459 (+)
LOC110532564 LOC106572515 coding upstream 831152 60079288 ~ 60088002 (+)
LOC110532563 LOC106572516 coding upstream 841248 60065296 ~ 60077906 (+)
LOC110532569 LOC106572541 coding downstream 184406 61103767 ~ 61156703 (+)
ptpn22 LOC106572545 coding downstream 412743 61332104 ~ 61362738 (+)
si:ch73-206d17.1 LOC106572549 coding downstream 742892 61662253 ~ 61687521 (+)
trnaa-ugc-37 NA coding downstream 811733 61731094 ~ 61731167 (+)
LOC110531232 djc16 coding downstream 1018058 61937419 ~ 61942640 (+)
G826901 NA non-coding upstream 20949 60897986 ~ 60898205 (+)
G826899 NA non-coding upstream 25710 60892835 ~ 60893444 (+)
G826897 NA non-coding upstream 29148 60889781 ~ 60890006 (+)
G826887 NA non-coding upstream 45883 60873038 ~ 60873271 (+)
G826867 NA non-coding upstream 73797 60845112 ~ 60845357 (+)
G826907 NA non-coding downstream 3108 60922469 ~ 60922687 (+)
LOC110531229 LOC106572568 non-coding downstream 12926 60636523 ~ 61072400 (+)
G826916 NA non-coding downstream 15929 60935290 ~ 60982068 (+)
G826917 NA non-coding downstream 20904 60940265 ~ 60941711 (+)
G826944 NA non-coding downstream 57623 60976984 ~ 60978558 (+)
G826751 NA other upstream 257248 60661369 ~ 60661906 (+)
G826653 NA other upstream 355757 60563080 ~ 60563397 (+)
G826505 NA other upstream 472620 60446030 ~ 60446534 (+)
G825749 NA other upstream 908729 60010009 ~ 60010425 (+)
G825484 NA other upstream 1320184 59598029 ~ 59598970 (+)
G827039 NA other downstream 293100 61212461 ~ 61251238 (+)
G828274 NA other downstream 1269821 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 1703878 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 2646217 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 3394717 64314078 ~ 64316656 (+)

Expression


Co-expression Network