G826988


Basic Information

Item Value
gene id G826988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 61062003 ~ 61063168 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU940346
gtatagtacagcacagtggagaacagcaGAGTGgaggacagtacagtatagtacagcacagtggaggacagtacagtatagtacagcacagtGGAGTACAGCACAGTGGTGGAGggcacagtatagtacagtacagtatagtacagcacagtatagtacagcacagtggagtacagtacagtggagtacagcacagtatagtacagtataggaCATTACATtggagtatagtacagtataggaCAGCACggtggagtacagtacagtacagcacagtatagtacagtacagtatagtacagcaccgtggagtatagtacagtataggaCAGTACAAAGGAGTACAGTACAtcggagtacagtacagtatagtacagcacagtggagtatagtacagtataggaCAGTACAATGAAGTACAGTACATcggagtacagtatagtacagtataggacagtACagtggagtacagtacagtatagtacagcacattatagtacagtatagtatagtacaacACAGTATAGTACAacacagtatactacagtatcgtatagtacagtacagtatagtacaacacagtatagtacagtataggacagcacagtggagtacagtacagtatagtacatcacagtatagtacagcacagtatagtacaacacagtatagtacagtataggacagcacagtatagtacagcacagtatagtacagtataggaCAGCACAGTAtaggacagcacagtacagcacagtatagtacagcacagtatagcacagtatagGACAGCACAGTATAGGACAGCACAGTATAGGACAGTATAGGACAGCACAGTATAGGACAGTATAGGacagcacagtatagtacagtataggaCagcacagtatagGACAGCacagtatagcacagtatagGACAGCacagtatagcacagtatagtacagcacagtatagcacagtatagtacagcacagtatagtacaacacagtatagtacagtataggaCAGTTCttacagtaaatg

Function

NR:

description
PREDICTED: repetitive proline-rich cell wall protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU940346 True 1026 lncRNA 0.41 3 61062003 61063168

Neighbor

gene id symbol gene type direction distance location
LOC110531228 LOC106572534 coding upstream 758581 60288691 ~ 60304205 (+)
LOC110532568 LOC106572510 coding upstream 775925 60281781 ~ 60286078 (+)
LOC110532566 LOC106572511 coding upstream 833544 60144449 ~ 60228459 (+)
LOC110532564 LOC106572515 coding upstream 974001 60079288 ~ 60088002 (+)
LOC110532563 LOC106572516 coding upstream 984097 60065296 ~ 60077906 (+)
LOC110532569 LOC106572541 coding downstream 40599 61103767 ~ 61156703 (+)
ptpn22 LOC106572545 coding downstream 268936 61332104 ~ 61362738 (+)
si:ch73-206d17.1 LOC106572549 coding downstream 599085 61662253 ~ 61687521 (+)
trnaa-ugc-37 NA coding downstream 667926 61731094 ~ 61731167 (+)
LOC110531232 djc16 coding downstream 874251 61937419 ~ 61942640 (+)
G826981 NA non-coding upstream 4238 61038389 ~ 61057765 (+)
G826984 NA non-coding upstream 6278 61054440 ~ 61055725 (+)
G826983 NA non-coding upstream 7917 61048078 ~ 61054086 (+)
G826916 NA non-coding upstream 79935 60935290 ~ 60982068 (+)
G826944 NA non-coding upstream 83445 60976984 ~ 60978558 (+)
G826995 NA non-coding downstream 18878 61082046 ~ 61082292 (+)
G827002 NA non-coding downstream 26267 61089435 ~ 61089680 (+)
G827004 NA non-coding downstream 30178 61093346 ~ 61094644 (+)
G827005 NA non-coding downstream 31750 61094918 ~ 61095120 (+)
G827038 NA non-coding downstream 140041 61203209 ~ 61247780 (+)
G826751 NA other upstream 400097 60661369 ~ 60661906 (+)
G826653 NA other upstream 498606 60563080 ~ 60563397 (+)
G826505 NA other upstream 615469 60446030 ~ 60446534 (+)
G825749 NA other upstream 1051578 60010009 ~ 60010425 (+)
G825484 NA other upstream 1463033 59598029 ~ 59598970 (+)
G827039 NA other downstream 149293 61212461 ~ 61251238 (+)
G828274 NA other downstream 1126014 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 1560071 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 2502410 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 3250910 64314078 ~ 64316656 (+)

Expression


Co-expression Network