G827145


Basic Information

Item Value
gene id G827145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 61439295 ~ 61439515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU940561
ctcatgactctctcttcctcttctctgtctcatgactcgctcttcctcttctctgtctcatgactcgctctttctctcgctcactTCGTCTCATGACTCTCTTGCTCTTTGGATCTCTCCCTCGGCAGTGTGAAGTGTTTGAAGCAATGAGTGACAGGGACAGACAAAAGCTTTTTGTGCAAGAGAGCTGTGAGCAAAACGAGTGCCTTCTCCACTTCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU940561 True 221 lncRNA 0.48 1 61439295 61439515

Neighbor

gene id symbol gene type direction distance location
ptpn22 LOC106572545 coding upstream 76557 61332104 ~ 61362738 (+)
LOC110532569 LOC106572541 coding upstream 282592 61103767 ~ 61156703 (+)
LOC110531229 LOC106572568 coding upstream 366895 60636523 ~ 61072400 (+)
LOC110531228 LOC106572534 coding upstream 1135873 60288691 ~ 60304205 (+)
LOC110532568 LOC106572510 coding upstream 1153217 60281781 ~ 60286078 (+)
si:ch73-206d17.1 LOC106572549 coding downstream 222738 61662253 ~ 61687521 (+)
trnaa-ugc-37 NA coding downstream 291579 61731094 ~ 61731167 (+)
LOC110531232 djc16 coding downstream 497904 61937419 ~ 61942640 (+)
mul1b mulan coding downstream 645493 62085008 ~ 62093546 (+)
LOC110532588 LOC106572556 coding downstream 733937 62173452 ~ 62186259 (+)
G827144 NA non-coding upstream 1075 61437979 ~ 61438220 (+)
G827037 NA non-coding upstream 135647 61298405 ~ 61303648 (+)
G827034 LOC106572544 non-coding upstream 136405 61214553 ~ 61302890 (+)
G827077 NA non-coding upstream 136989 61297493 ~ 61302306 (+)
G827042 NA non-coding upstream 176639 61220583 ~ 61262656 (+)
G827147 NA non-coding downstream 1180 61440695 ~ 61440950 (+)
G827148 NA non-coding downstream 1850 61441365 ~ 61441606 (+)
G827149 NA non-coding downstream 9694 61449209 ~ 61449528 (+)
G827150 NA non-coding downstream 13600 61453115 ~ 61453548 (+)
G827151 NA non-coding downstream 14524 61454039 ~ 61454263 (+)
G827039 NA other upstream 188057 61212461 ~ 61251238 (+)
G826751 NA other upstream 777389 60661369 ~ 60661906 (+)
G826653 NA other upstream 875898 60563080 ~ 60563397 (+)
G826505 NA other upstream 992761 60446030 ~ 60446534 (+)
G825749 NA other upstream 1428870 60010009 ~ 60010425 (+)
G828274 NA other downstream 749667 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 1183724 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 2126063 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 2874563 64314078 ~ 64316656 (+)
G830923 NA other downstream 3226233 64665748 ~ 64666311 (+)

Expression


Co-expression Network