G827154 (magi3)


Basic Information

Item Value
gene id G827154
gene name magi3
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 61464645 ~ 61464862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU940570
CTGTGAGTCCGTTGACCAGgggagacctctctctctcctcctcgtcctcctcctcggGGGCTGCACTGTCCTTCCTGTCCATTTTGCTGACAGAGGTGGTGCGTTTCCTCTGGACCTCTGTATCAAACTCCTCATCAAACAGCACCTGATCTACCAGGTCAGGCTGCACCGGGCTGGGCTCCGCTGGGGGCTTGGGTGTCCCGTAGTAGTTCCCtggt

Function

symbol description
magi3 Predicted to enable frizzled binding activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within positive regulation of JUN kinase activity. Located in cell junction.

NR:

description
membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU940570 True 218 lncRNA 0.60 1 61464645 61464862

Neighbor

gene id symbol gene type direction distance location
ptpn22 LOC106572545 coding upstream 101907 61332104 ~ 61362738 (+)
LOC110532569 LOC106572541 coding upstream 307942 61103767 ~ 61156703 (+)
LOC110531229 LOC106572568 coding upstream 392245 60636523 ~ 61072400 (+)
LOC110531228 LOC106572534 coding upstream 1161223 60288691 ~ 60304205 (+)
LOC110532568 LOC106572510 coding upstream 1178567 60281781 ~ 60286078 (+)
si:ch73-206d17.1 LOC106572549 coding downstream 197391 61662253 ~ 61687521 (+)
trnaa-ugc-37 NA coding downstream 266232 61731094 ~ 61731167 (+)
LOC110531232 djc16 coding downstream 472557 61937419 ~ 61942640 (+)
mul1b mulan coding downstream 620146 62085008 ~ 62093546 (+)
LOC110532588 LOC106572556 coding downstream 708590 62173452 ~ 62186259 (+)
G827152 NA non-coding upstream 8364 61456013 ~ 61456281 (+)
G827151 NA non-coding upstream 10382 61454039 ~ 61454263 (+)
G827150 NA non-coding upstream 11097 61453115 ~ 61453548 (+)
G827149 NA non-coding upstream 15117 61449209 ~ 61449528 (+)
G827148 NA non-coding upstream 23039 61441365 ~ 61441606 (+)
G827155 NA non-coding downstream 523 61465385 ~ 61465609 (+)
G827159 NA non-coding downstream 9679 61474541 ~ 61531612 (+)
G827170 NA non-coding downstream 25170 61490032 ~ 61490389 (+)
G827189 NA non-coding downstream 66167 61531029 ~ 61539353 (+)
G827201 NA non-coding downstream 85572 61550434 ~ 61550788 (+)
G827039 NA other upstream 213407 61212461 ~ 61251238 (+)
G826751 NA other upstream 802739 60661369 ~ 60661906 (+)
G826653 NA other upstream 901248 60563080 ~ 60563397 (+)
G826505 NA other upstream 1018111 60446030 ~ 60446534 (+)
G825749 NA other upstream 1454220 60010009 ~ 60010425 (+)
G828274 NA other downstream 724320 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 1158377 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 2100716 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 2849216 64314078 ~ 64316656 (+)
G830923 NA other downstream 3200886 64665748 ~ 64666311 (+)

Expression


Co-expression Network