G827159


Basic Information

Item Value
gene id G827159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 61474541 ~ 61531612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU940576
ttcacagtaggtattgtgttctttggatgcaactcagcattctttgttctccaaacacgacgagttgagtttttaccaaaaagttattttggtttcatctgaccatatgacattctcccaatcttcttctggatcatccaaatgctctctagcaaacttcagacgggcctggacatgtactggcttaagcagggggacacgtctggcactgcaggatttgagtccctggcggtgtgttactgatggtaggctttgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU940576 True 257 lncRNA 0.45 2 61474541 61531612

Neighbor

gene id symbol gene type direction distance location
ptpn22 LOC106572545 coding upstream 111803 61332104 ~ 61362738 (+)
LOC110532569 LOC106572541 coding upstream 317838 61103767 ~ 61156703 (+)
LOC110531229 LOC106572568 coding upstream 402141 60636523 ~ 61072400 (+)
LOC110531228 LOC106572534 coding upstream 1171119 60288691 ~ 60304205 (+)
LOC110532568 LOC106572510 coding upstream 1188463 60281781 ~ 60286078 (+)
si:ch73-206d17.1 LOC106572549 coding downstream 130641 61662253 ~ 61687521 (+)
trnaa-ugc-37 NA coding downstream 199482 61731094 ~ 61731167 (+)
LOC110531232 djc16 coding downstream 405807 61937419 ~ 61942640 (+)
mul1b mulan coding downstream 553396 62085008 ~ 62093546 (+)
LOC110532588 LOC106572556 coding downstream 641840 62173452 ~ 62186259 (+)
G827155 NA non-coding upstream 8932 61465385 ~ 61465609 (+)
G827154 magi3 non-coding upstream 9679 61464645 ~ 61464862 (+)
G827152 NA non-coding upstream 18260 61456013 ~ 61456281 (+)
G827151 NA non-coding upstream 20278 61454039 ~ 61454263 (+)
G827150 NA non-coding upstream 20993 61453115 ~ 61453548 (+)
G827201 NA non-coding downstream 18822 61550434 ~ 61550788 (+)
G827213 NA non-coding downstream 50238 61581850 ~ 61582107 (+)
G827218 NA non-coding downstream 54805 61586417 ~ 61586700 (+)
G827221 NA non-coding downstream 59182 61590794 ~ 61591021 (+)
G827245 NA non-coding downstream 88199 61619811 ~ 61640637 (+)
G827039 NA other upstream 223303 61212461 ~ 61251238 (+)
G826751 NA other upstream 812635 60661369 ~ 60661906 (+)
G826653 NA other upstream 911144 60563080 ~ 60563397 (+)
G826505 NA other upstream 1028007 60446030 ~ 60446534 (+)
G825749 NA other upstream 1464116 60010009 ~ 60010425 (+)
G828274 NA other downstream 657570 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 1091627 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 2033966 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 2782466 64314078 ~ 64316656 (+)
G830923 NA other downstream 3134136 64665748 ~ 64666311 (+)

Expression


Co-expression Network