G828181


Basic Information

Item Value
gene id G828181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 62014810 ~ 62015019 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU941714
aCACTGTGTTATGCagtgatgcgcacggtgtctccagttcgcattcatagcctggtgcgctctattccagctccttgCATTTTCcaggctagaatgggcatccagccaggacggatggtgccggctcagcgctcctggtctccagtacacctccttggaccaggatatcctgcgccggctctgcgtactgtgtctGTGATGcgtctgcat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595571

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU941714 True 210 lncRNA 0.57 1 62014810 62015019

Neighbor

gene id symbol gene type direction distance location
LOC110531232 djc16 coding upstream 72170 61937419 ~ 61942640 (+)
trnaa-ugc-37 NA coding upstream 283643 61731094 ~ 61731167 (+)
si:ch73-206d17.1 LOC106572549 coding upstream 327289 61662253 ~ 61687521 (+)
ptpn22 LOC106572545 coding upstream 652072 61332104 ~ 61362738 (+)
LOC110532569 LOC106572541 coding upstream 858107 61103767 ~ 61156703 (+)
mul1b mulan coding downstream 69989 62085008 ~ 62093546 (+)
LOC110532588 LOC106572556 coding downstream 158433 62173452 ~ 62186259 (+)
LOC110532589 cpsf3l coding downstream 181884 62196903 ~ 62206569 (+)
LOC110532593 LOC106572560 coding downstream 210765 62225784 ~ 62323683 (+)
LOC110532591 LOC106572559 coding downstream 311971 62326990 ~ 62340784 (+)
G828172 NA non-coding upstream 6165 62008195 ~ 62008645 (+)
G828151 NA non-coding upstream 19558 61994979 ~ 61995252 (+)
G827423 agmat non-coding upstream 66197 61945895 ~ 61948613 (+)
G827422 NA non-coding upstream 69504 61944855 ~ 61945306 (+)
G827458 NA non-coding upstream 70285 61943934 ~ 61944525 (+)
G828205 NA non-coding downstream 40719 62055738 ~ 62062734 (+)
G828206 NA non-coding downstream 40939 62055958 ~ 62060704 (+)
G828209 NA non-coding downstream 50641 62065660 ~ 62066021 (+)
G828254 NA non-coding downstream 126511 62141530 ~ 62145119 (+)
G828408 NA non-coding downstream 200592 62215611 ~ 62216012 (+)
G827039 NA other upstream 763572 61212461 ~ 61251238 (+)
G826751 NA other upstream 1352904 60661369 ~ 60661906 (+)
G826653 NA other upstream 1451413 60563080 ~ 60563397 (+)
G826505 NA other upstream 1568276 60446030 ~ 60446534 (+)
G825749 NA other upstream 2004385 60010009 ~ 60010425 (+)
G828274 NA other downstream 174163 62189182 ~ 62190606 (+)
LOC110532602 NA other downstream 608220 62623239 ~ 62627845 (+)
LOC110532619 LOC106572645 other downstream 1550559 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 2299059 64314078 ~ 64316656 (+)
G830923 NA other downstream 2650729 64665748 ~ 64666311 (+)

Expression


Co-expression Network