G829074


Basic Information

Item Value
gene id G829074
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 62973039 ~ 62973534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU942701
tctccttccagttctctgctgccaatgactggaacgaactacaaaaatctctgaaacttgaaacacttatctccctcactagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccacctataatttagcccaaacaactacctctttccctactgtatttaatttatttatttattttgctcctttgcacccccattatttgtatttctactttgcacattctcccattgcaaatctaccattccagtgttttacttgctatattgtatttactttgccaccatggcctttttgcctttacctcccttatctcacctcatttgctcacatcgtatatagacttgtttatactgtattgttgactgtatgtttgttttactccatgtgtaactctgtgtcgttgtatgtgtcgagcaattgtaaatgagaacttgttctcaacttgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU942701 True 469 lncRNA 0.39 2 62973039 62973534

Neighbor

gene id symbol gene type direction distance location
LOC110532609 LOC106572637 coding upstream 68620 62897713 ~ 62904419 (+)
LOC110532607 LOC106572638 coding upstream 105479 62817177 ~ 62867560 (+)
LOC110532606 LOC106572647 coding upstream 166921 62804198 ~ 62806118 (+)
LOC110532605 LOC106572639 coding upstream 183229 62762388 ~ 62789810 (+)
LOC110532604 LOC106572641 coding upstream 216137 62639800 ~ 62756902 (+)
LOC110532611 LOC106572634 coding downstream 38834 63012368 ~ 63026673 (+)
LOC110532612 LOC106572633 coding downstream 59940 63033474 ~ 63045519 (+)
LOC110532614 LOC106572631 coding downstream 386048 63359582 ~ 63363557 (+)
sall4 LOC106572630 coding downstream 428877 63402411 ~ 63410632 (+)
LOC110532617 LOC106572629 coding downstream 437670 63411204 ~ 63453087 (+)
G829013 NA non-coding upstream 91943 62880551 ~ 62881096 (+)
G828868 NA non-coding upstream 368071 62601293 ~ 62604968 (+)
klhl21 LOC106572566 non-coding upstream 375308 62579179 ~ 62606419 (+)
G828838 NA non-coding upstream 399046 62573179 ~ 62573993 (+)
G828832 NA non-coding upstream 402168 62570625 ~ 62570871 (+)
G829082 NA non-coding downstream 7797 62981331 ~ 62981728 (+)
G829085 NA non-coding downstream 11479 62985013 ~ 62985236 (+)
G829118 NA non-coding downstream 77638 63051172 ~ 63116057 (+)
G829218 NA non-coding downstream 238704 63212238 ~ 63242095 (+)
G829257 NA non-coding downstream 297938 63271472 ~ 63271743 (+)
LOC110532602 NA other upstream 345197 62623239 ~ 62627845 (+)
G828274 NA other upstream 782433 62189182 ~ 62190606 (+)
G827039 NA other upstream 1721801 61212461 ~ 61251238 (+)
G826751 NA other upstream 2311133 60661369 ~ 60661906 (+)
G826653 NA other upstream 2409642 60563080 ~ 60563397 (+)
LOC110532619 LOC106572645 other downstream 592044 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 1340544 64314078 ~ 64316656 (+)
G830923 NA other downstream 1692214 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 1906173 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 2392757 65186569 ~ 65405501 (+)

Expression


Co-expression Network