G829118


Basic Information

Item Value
gene id G829118
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 63051172 ~ 63116057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU942753
ttgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgtgattacagctgtaagtcgcttggggtatgtctatcagttttgcacatcgagagactgaaattttttccccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagcctccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccccgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU942753 True 503 lncRNA 0.44 2 63051172 63116057

Neighbor

gene id symbol gene type direction distance location
LOC110532612 LOC106572633 coding upstream 5653 63033474 ~ 63045519 (+)
LOC110532611 LOC106572634 coding upstream 24499 63012368 ~ 63026673 (+)
LOC110532609 LOC106572637 coding upstream 146753 62897713 ~ 62904419 (+)
LOC110532607 LOC106572638 coding upstream 183612 62817177 ~ 62867560 (+)
LOC110532606 LOC106572647 coding upstream 245054 62804198 ~ 62806118 (+)
LOC110532614 LOC106572631 coding downstream 243525 63359582 ~ 63363557 (+)
sall4 LOC106572630 coding downstream 286354 63402411 ~ 63410632 (+)
LOC110532617 LOC106572629 coding downstream 295147 63411204 ~ 63453087 (+)
LOC110532618 LOC106572627 coding downstream 344906 63460963 ~ 63513676 (+)
LOC110532619 LOC106572645 coding downstream 449530 63565578 ~ 63601970 (+)
G829085 NA non-coding upstream 65936 62985013 ~ 62985236 (+)
G829082 NA non-coding upstream 69444 62981331 ~ 62981728 (+)
G829074 NA non-coding upstream 77638 62973039 ~ 62973534 (+)
G829013 NA non-coding upstream 170076 62880551 ~ 62881096 (+)
G828868 NA non-coding upstream 446204 62601293 ~ 62604968 (+)
G829218 NA non-coding downstream 96181 63212238 ~ 63242095 (+)
G829257 NA non-coding downstream 155415 63271472 ~ 63271743 (+)
G829261 NA non-coding downstream 161835 63277892 ~ 63278092 (+)
G829267 NA non-coding downstream 177366 63293423 ~ 63293630 (+)
G829288 NA non-coding downstream 203926 63319983 ~ 63413754 (+)
LOC110532602 NA other upstream 423330 62623239 ~ 62627845 (+)
G828274 NA other upstream 860566 62189182 ~ 62190606 (+)
G827039 NA other upstream 1799934 61212461 ~ 61251238 (+)
G826751 NA other upstream 2389266 60661369 ~ 60661906 (+)
G826653 NA other upstream 2487775 60563080 ~ 60563397 (+)
G830755 gp182 other downstream 1198021 64314078 ~ 64316656 (+)
G830923 NA other downstream 1549691 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 1763650 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 2250234 65186569 ~ 65405501 (+)

Expression


Co-expression Network