G829257


Basic Information

Item Value
gene id G829257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 63271472 ~ 63271743 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU942899
tgagtgttgacgaggacaaggctggagatcactctgtcatgctgattgagtccgaattacagactggaagcttcaaaaggagggtggtgcttggaatcattgttcttcctctgtcaaccatggttacctgcaaggaaacatgtgccgtcatcattgctttgcacaaaaagggcttcccaggcaaggatattgctgccagtaagattgcacctaaatcaaccatttatcggatcatcaagaacttcaaggagagcggttcaattgttgtgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU942899 True 272 lncRNA 0.46 1 63271472 63271743

Neighbor

gene id symbol gene type direction distance location
LOC110532612 LOC106572633 coding upstream 225953 63033474 ~ 63045519 (+)
LOC110532611 LOC106572634 coding upstream 244799 63012368 ~ 63026673 (+)
LOC110532609 LOC106572637 coding upstream 367053 62897713 ~ 62904419 (+)
LOC110532607 LOC106572638 coding upstream 403912 62817177 ~ 62867560 (+)
LOC110532606 LOC106572647 coding upstream 465354 62804198 ~ 62806118 (+)
LOC110532614 LOC106572631 coding downstream 87839 63359582 ~ 63363557 (+)
sall4 LOC106572630 coding downstream 130668 63402411 ~ 63410632 (+)
LOC110532617 LOC106572629 coding downstream 139461 63411204 ~ 63453087 (+)
LOC110532618 LOC106572627 coding downstream 189220 63460963 ~ 63513676 (+)
LOC110532619 LOC106572645 coding downstream 293844 63565578 ~ 63601970 (+)
G829218 NA non-coding upstream 29377 63212238 ~ 63242095 (+)
G829118 NA non-coding upstream 155415 63051172 ~ 63116057 (+)
G829085 NA non-coding upstream 286236 62985013 ~ 62985236 (+)
G829082 NA non-coding upstream 289744 62981331 ~ 62981728 (+)
G829074 NA non-coding upstream 297938 62973039 ~ 62973534 (+)
G829261 NA non-coding downstream 6149 63277892 ~ 63278092 (+)
G829267 NA non-coding downstream 21680 63293423 ~ 63293630 (+)
G829288 NA non-coding downstream 48240 63319983 ~ 63413754 (+)
G829347 NA non-coding downstream 182089 63453832 ~ 63454040 (+)
G829351 NA non-coding downstream 185803 63457546 ~ 63457790 (+)
LOC110532602 NA other upstream 643630 62623239 ~ 62627845 (+)
G828274 NA other upstream 1080866 62189182 ~ 62190606 (+)
G827039 NA other upstream 2020234 61212461 ~ 61251238 (+)
G826751 NA other upstream 2609566 60661369 ~ 60661906 (+)
G826653 NA other upstream 2708075 60563080 ~ 60563397 (+)
G830755 gp182 other downstream 1042335 64314078 ~ 64316656 (+)
G830923 NA other downstream 1394005 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 1607964 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 2094548 65186569 ~ 65405501 (+)

Expression


Co-expression Network