G829351


Basic Information

Item Value
gene id G829351
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 63457546 ~ 63457790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU943002
CTGTACGTCCTGGcttctgatctggttttgacctttttgcccgtccacgaccattctcttgtctACCcatttggattaataaacattgtaagactccaaccatctgcctcttgtgtctgcatttgggtctcgccttgtgccttgatacagAGGTCAAAATCCAGAGACGGGGCAAAgttacaggacggcaggcagggtcaggggcaggcagagttgTCAGGCgggcgggctcagggtcaggacag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106573259

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU943002 True 245 lncRNA 0.53 1 63457546 63457790

Neighbor

gene id symbol gene type direction distance location
LOC110532617 LOC106572629 coding upstream 4459 63411204 ~ 63453087 (+)
sall4 LOC106572630 coding upstream 46914 63402411 ~ 63410632 (+)
LOC110532614 LOC106572631 coding upstream 93989 63359582 ~ 63363557 (+)
LOC110532612 LOC106572633 coding upstream 412027 63033474 ~ 63045519 (+)
LOC110532611 LOC106572634 coding upstream 430873 63012368 ~ 63026673 (+)
LOC110532618 LOC106572627 coding downstream 3173 63460963 ~ 63513676 (+)
LOC110532619 LOC106572645 coding downstream 107797 63565578 ~ 63601970 (+)
LOC110532620 LOC106572626 coding downstream 148777 63606567 ~ 63647680 (+)
LOC110532622 LOC106572625 coding downstream 190974 63648764 ~ 63695332 (+)
g0s2 LOC106572624 coding downstream 250854 63708644 ~ 63709691 (+)
G829347 NA non-coding upstream 3506 63453832 ~ 63454040 (+)
G829288 NA non-coding upstream 43792 63319983 ~ 63413754 (+)
G829267 NA non-coding upstream 163916 63293423 ~ 63293630 (+)
G829261 NA non-coding upstream 179454 63277892 ~ 63278092 (+)
G829257 NA non-coding upstream 185803 63271472 ~ 63271743 (+)
G829530 LOC100194719 non-coding downstream 311327 63769117 ~ 63771336 (+)
G829539 NA non-coding downstream 332175 63789965 ~ 63790241 (+)
G829540 NA non-coding downstream 332631 63790421 ~ 63790709 (+)
G829541 NA non-coding downstream 332998 63790788 ~ 63791419 (+)
G829543 NA non-coding downstream 334982 63792772 ~ 63792985 (+)
LOC110532602 NA other upstream 829704 62623239 ~ 62627845 (+)
G828274 NA other upstream 1266940 62189182 ~ 62190606 (+)
G827039 NA other upstream 2206308 61212461 ~ 61251238 (+)
G826751 NA other upstream 2795640 60661369 ~ 60661906 (+)
G826653 NA other upstream 2894149 60563080 ~ 60563397 (+)
G830755 gp182 other downstream 856288 64314078 ~ 64316656 (+)
G830923 NA other downstream 1207958 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 1421917 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 1908501 65186569 ~ 65405501 (+)

Expression


Co-expression Network