G830423



Basic Information


Item Value
gene id G830423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 63949772 ~ 63950046 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU944206
AATTAAGATTGTGTGGTTCATCCTTCCATATAGATTAACCCAAAAGATTAACAATAGAATGAGATTTTTCCATCAAAAGACGGAGCAGATTATTCAGGGGAGAAAACGGCTATAAAAACTATCCATTTCGTTTGGAGTTTGGGACATGTATATTTACCAATATTTTTTTTGGAGTGTTTAGGTCTGCCTAAAGAGCTGTTTGTCATCGTAGAACACATGCTTTGGCTGGCCCTCTACCTCCCGACATCCCCAGGTTGTttcaataaaacaaaata

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU944206 True 275 lncRNA 0.37 1 63949772 63950046

Neighbor


gene id symbol gene type direction distance location
LOC110532631 ada coding upstream 86359 63845271 ~ 63863413 (+)
LOC110532629 LOC106572620 coding upstream 212756 63729172 ~ 63737016 (+)
LOC110532625 LOC106572622 coding upstream 233497 63710544 ~ 63716275 (+)
g0s2 LOC106572624 coding upstream 240081 63708644 ~ 63709691 (+)
LOC110532622 LOC106572625 coding upstream 254440 63648764 ~ 63695332 (+)
LOC110532638 LOC106572608 coding downstream 17126 63967172 ~ 63971893 (+)
jph2 LOC106572606 coding downstream 43110 63993156 ~ 64022233 (+)
LOC110532642 LOC105013598 coding downstream 88529 64038575 ~ 64041225 (+)
LOC110532647 LOC106572599 coding downstream 138637 64088683 ~ 64094297 (+)
LOC110532646 LOC106572598 coding downstream 149597 64099643 ~ 64110913 (+)
G830422 NA non-coding upstream 112 63949335 ~ 63949660 (+)
G830405 NA non-coding upstream 8689 63936547 ~ 63941083 (+)
G830407 NA non-coding upstream 13323 63926673 ~ 63936449 (+)
G830347 NA non-coding upstream 26841 63826603 ~ 63922931 (+)
G830383 NA non-coding upstream 71012 63874898 ~ 63878760 (+)
G830428 NA non-coding downstream 8441 63958487 ~ 63958828 (+)
G830430 NA non-coding downstream 13389 63963435 ~ 63963682 (+)
G830445 NA non-coding downstream 42580 63992626 ~ 63992844 (+)
G830408 LOC106572604 non-coding downstream 74556 64024602 ~ 64032351 (+)
LOC110532619 LOC106572645 other upstream 352004 63565578 ~ 63601970 (+)
LOC110532602 NA other upstream 1321930 62623239 ~ 62627845 (+)
G828274 NA other upstream 1759166 62189182 ~ 62190606 (+)
G827039 NA other upstream 2698534 61212461 ~ 61251238 (+)
G826751 NA other upstream 3287866 60661369 ~ 60661906 (+)
G830755 gp182 other downstream 364032 64314078 ~ 64316656 (+)
G830923 NA other downstream 715702 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 929661 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 1416245 65186569 ~ 65405501 (+)
G831810 NA other downstream 1564347 65514393 ~ 65514985 (+)

Expression



Co-expression Network