G830458


Basic Information

Item Value
gene id G830458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 64050821 ~ 64062498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU944248
gttttttttaaaggcagtaaatgaggctgaatgaactgtttcgctgccagacaaggcccGCTGATAGTCAGGTGTTGTGGTGGTAAGGATTAACGCCATGGTGGTGAAAAGaaggctctgctgttgggacagctttatgcaGGCCCTAACATGTGGGTGCCTTTTGTCATTGTTATAGTGCAATTTATGTGTTGTTTAGCTTTGCATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU944248 True 209 lncRNA 0.45 2 64050821 64062498

Neighbor

gene id symbol gene type direction distance location
LOC110532642 LOC105013598 coding upstream 9596 64038575 ~ 64041225 (+)
jph2 LOC106572606 coding upstream 28588 63993156 ~ 64022233 (+)
LOC110532638 LOC106572608 coding upstream 78928 63967172 ~ 63971893 (+)
LOC110532631 ada coding upstream 187408 63845271 ~ 63863413 (+)
LOC110532629 LOC106572620 coding upstream 313805 63729172 ~ 63737016 (+)
LOC110532647 LOC106572599 coding downstream 26185 64088683 ~ 64094297 (+)
LOC110532646 LOC106572598 coding downstream 37145 64099643 ~ 64110913 (+)
LOC110532648 LOC106572596 coding downstream 72190 64134688 ~ 64166582 (+)
LOC110532654 LOC106572591 coding downstream 218074 64280572 ~ 64308563 (+)
LOC110532652 LOC106572590 coding downstream 246136 64308634 ~ 64312974 (+)
G830408 LOC106572604 non-coding upstream 18470 64024602 ~ 64032351 (+)
G830445 NA non-coding upstream 57977 63992626 ~ 63992844 (+)
G830430 NA non-coding upstream 87139 63963435 ~ 63963682 (+)
G830428 NA non-coding upstream 91993 63958487 ~ 63958828 (+)
G830471 NA non-coding downstream 24564 64087062 ~ 64087298 (+)
G830490 NA non-coding downstream 50048 64112546 ~ 64112988 (+)
G830492 yo84 non-coding downstream 52776 64115274 ~ 64115597 (+)
G830495 NA non-coding downstream 54888 64117386 ~ 64117880 (+)
G830496 NA non-coding downstream 56164 64118662 ~ 64118934 (+)
LOC110532619 LOC106572645 other upstream 453053 63565578 ~ 63601970 (+)
LOC110532602 NA other upstream 1422979 62623239 ~ 62627845 (+)
G828274 NA other upstream 1860215 62189182 ~ 62190606 (+)
G827039 NA other upstream 2799583 61212461 ~ 61251238 (+)
G826751 NA other upstream 3388915 60661369 ~ 60661906 (+)
G830755 gp182 other downstream 251580 64314078 ~ 64316656 (+)
G830923 NA other downstream 603250 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 817209 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 1303793 65186569 ~ 65405501 (+)
G831810 NA other downstream 1451895 65514393 ~ 65514985 (+)

Expression


Co-expression Network