G830490


Basic Information

Item Value
gene id G830490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 64112546 ~ 64112988 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU944282
catttatgcTGTCCCCTcaccctgactacaccgctcgcgtcgcgtgcgctgcaaaataaatgtagaaatctatgttattcaatagCCCTTATGCACATTCCATGATCGAACGTTCTAAACACACTTCCTATCCGTTTGGCAATTTCCGGTCAGTCTAGTTGTTATCGACGATATAACGTTACTACCACTATGTCGCAGTTTTTTACTAGGTGTCTTCAGGATTTGCCTCAAATTAATATTAATGATGTACATCGAATTGTTACATCAGCCTCCGAGACTCCAGCTAGCAAGAATGAAAAGGGGTTCAATATGTATTTAGGAAGTTACATAACTATGAAGGTGAGTACCAAGTCAGtgagataacgttagctagctacaatcattagctagctaattGAACTattaactgtagctagctagttacttcGTAAAATGACGTAAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU944282 True 443 lncRNA 0.40 1 64112546 64112988

Neighbor

gene id symbol gene type direction distance location
LOC110532646 LOC106572598 coding upstream 1633 64099643 ~ 64110913 (+)
LOC110532647 LOC106572599 coding upstream 18249 64088683 ~ 64094297 (+)
LOC110532642 LOC105013598 coding upstream 71321 64038575 ~ 64041225 (+)
jph2 LOC106572606 coding upstream 90313 63993156 ~ 64022233 (+)
LOC110532638 LOC106572608 coding upstream 140653 63967172 ~ 63971893 (+)
LOC110532648 LOC106572596 coding downstream 21700 64134688 ~ 64166582 (+)
LOC110532654 LOC106572591 coding downstream 167584 64280572 ~ 64308563 (+)
LOC110532652 LOC106572590 coding downstream 195646 64308634 ~ 64312974 (+)
LOC110516183 LOC106572588 coding downstream 330384 64443372 ~ 64453470 (+)
LOC110532661 LOC106572584 coding downstream 369567 64482555 ~ 64490204 (+)
G830471 NA non-coding upstream 25248 64087062 ~ 64087298 (+)
G830458 NA non-coding upstream 50048 64050821 ~ 64062498 (+)
G830408 LOC106572604 non-coding upstream 80195 64024602 ~ 64032351 (+)
G830445 NA non-coding upstream 119702 63992626 ~ 63992844 (+)
G830492 yo84 non-coding downstream 2286 64115274 ~ 64115597 (+)
G830495 NA non-coding downstream 4398 64117386 ~ 64117880 (+)
G830496 NA non-coding downstream 5674 64118662 ~ 64118934 (+)
G830479 NA non-coding downstream 16727 64129715 ~ 64167508 (+)
G830477 NA non-coding downstream 49056 64162044 ~ 64174370 (+)
LOC110532619 LOC106572645 other upstream 514778 63565578 ~ 63601970 (+)
LOC110532602 NA other upstream 1484704 62623239 ~ 62627845 (+)
G828274 NA other upstream 1921940 62189182 ~ 62190606 (+)
G827039 NA other upstream 2861308 61212461 ~ 61251238 (+)
G826751 NA other upstream 3450640 60661369 ~ 60661906 (+)
G830755 gp182 other downstream 201090 64314078 ~ 64316656 (+)
G830923 NA other downstream 552760 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 766719 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 1253303 65186569 ~ 65405501 (+)
G831810 NA other downstream 1401405 65514393 ~ 65514985 (+)

Expression


Co-expression Network