XLOC_027266 (recql)


Basic Information

Item Value
gene id XLOC_027266
gene name recql
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 17424855 ~ 17538270 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053692
TAACTTTAGTCATGAAACTGAAAAAACAGTtcccaaaaaataataaaaagagcaATTGATTTCATTAttgcaacaaaaaaatattttatgaacaCCGAAGTCTGcacaggaataaatgacatttaaaataaaacattttaccaatatatttttatttaaataaattaaactgtttAAATCTTACTGacatattactttatttttaatagtatacACTCTGTAGTTAGTGTAACAACTAGAGTTGTTTGTTGATGCCATCATAGGTTGCTGGAGTCATCGAAAGGGTTTGCAATGACGGAGTTGTGGATGAGGATGAAGAGAGGCAGGTGAGCAAGGAAGTCGAGAAGGTCGAGAGAGTGCAGATTGCGAAGTTCGCGTCTCACCGAAGCCTCATGTTCTGGCCTGATGCCTCCTGCCTTGAGCTCCATCAGCAGCTGCTCAGCCTCAATGCAGCCCTCTGGTGCCACAGTGCCCCCTGTCTGAGCCTCCAGCAGGAACAAGAATAACTGCTGCAGAACGAGCACACATTCTCAGACTCTTGTCTAGTCTGGACTCCATGCAGTGATTGGTCAACTTCTCGTTAATGGTCGCGTGGGGCAACGAGGACTTCATCTGGGGCAAACAAGAGAAAGTGGAAGGAAGCTGGTTTAGGATCATTCAGCGTCCTCCTTATCTGTAACCTTCAAGAAGAGCTGCATAAAATGGCTAATGTTGATGATGCTCGGGAAGAGTTGGACTCGGTGGAGGCAGAGCTGGAGATGGTGGAATTGCAGATCTCTGAGTTACTGGAGAAACAGACGAGGCTAAACTCCAGGAAGAACAAACTACTGAAGGTCTTGGAGGGAGCATGCAGCTCAGCCCAGCCTTCCGGATCCGGCAAAACTCCCAAATCTTCATTCAGCAAACAGGACCTTCAACACTATGAAGACTCTGATTTCTCTTGGTCTAAAGAAGTTCAGGTGAATCTATGTAACATATTCCAGCTTTCCAAATTTCGCCCTCTGCAACGAGCGGCCATCAATCTGAGCATGTCAGGGAAAGATCTTTTCCTGGTAATGCCCACCGGTCGAGGAAAAAGCTTATGTTACCAGCTGCCAGCCCTCTGCTCTAAAGGTTTCACATTAGTTATCGCCCCACTGGTGTCTCTGATGGAGGATCAGCTGATGTATCTGCAGTCCGTTAATGTACCAGCAGTGACTCTCAATGCCTCCAGTTCAAAGGAGGACTCTAAAAGGATTTTGGCAGGGATGACGGATAAAAATAGCCCCTTCAAATTGCTCTATGTAACCCCAGAGAAAATCGCTAAGAGCAAACTACTGATGTCCAAACTGGAAAAGGCCTTTAACATGGGTCTGCTGGCACGCATTGCAGTAGATGAAGTTCATTGCTGTAGTCAATGGGGCCATGACTTTAGGCCGGATTACAAACTCTTGGGTATCCTAAAGAGGCAGTTCCCTAATGTCCCATTAATCGGACTGACTGCCACTGCTACTAGCAACGTTCTTAAAGACTGCCAGAAGATCCTGTGCGTTCAGGAACCCGTTACACTTACAGCACCGTTCAACAGACCAAACCTTTACTATGAGGTTCGTTTTAAGGATAACGAAGACTGCACTGATCAAATTGCATCACTGATCAGAGGGAGATACAAAAACCAATCAGGGATTGTATATGTGTTCTCTCAGAAAGATGCAGAAGTTGTAGCTACAGAGCTGCAGAAGCGGGATATTGTTGCACAGCCATATCATGCCAACATGGAGCCTTCGCACAAGTCTCTGGTGCATCAGCGATGGTCCTCCAAGAAAATCCAGGTGGTTGTTGCCACTGTGGCTTTTGGGATGGGCATCGACAAGGCTGACGTACGATTTGTAATCCATCACACCATCAGTAAATCTATCGAAAATTACTATCAGGAAAGTGGACGTGCAGgaaGGGATGATAGCCCTGCAGATTGTATTGTGTTTTTTGGGTTTATGGACATCTTTAGGATAAGCACAATGGTTGTGATGGAGAACACTGGACAGCAGAAGCTCCATAATATGGTGGCATATTGTCAAAATGTGGACAGGTGTCGTCGTGCTATGATGGCCATTCATTTTGATGAAGTTTGGAATGATGAAGAGTGCAATGAAATGTGTGATGTCTGTCGGCATGGCAACGACTACATCACAATGGACATCACGCAACATGCTCGAGATGTTCTTCATATTGTAGAATTGGCCAGCTCTATGGATGAAAAGTTGACACCTCTGAAAGTCTGTGATGCTTGGCTGGGGAAAGGGCCCGCCAAGCAGCGCAAAATGATAAAGCTCACATCCCTGTCACGCCTGGAGGTGGAGTCTGTTATCATCCACCTTTTGTTGCATGGCTACTTCAGTGAGGACTTCAGCTTCACTCCCTACACAACACACTTCTACCTGAAGCTGGGTCGTAAGGCAGCCCTCCTGAAGAACAGCGGTCACTCCATCACTATGAAGATGAGGAGGAGAGGGACGTCCCAGAGTACTGTAAAGAAAGTTTCAGAAAGTTCTGGGGAGAAAAGTAGATCCAAAGTAGAAGGAAAAAGACCGGCTGAAAGTGGCGACCAAAAATCAGCCAAGAAAGTCAAGCCTCTTCCCTAG
>TCONS_00053691
TAACTTTAGTCATGAAACTGAAAAAACAGTtcccaaaaaataataaaaagagcaATTGATTTCATTAttgcaacaaaaaaatattttatgaacaCCGAAGTCTGcacaggaataaatgacatttaaaataaaacattttaccaatatatttttatttaaataaattaaactgtttAAATCTTACTGacatattactttatttttaatagtatacACTCTGTAGTTAGTGTAACAACTAGAGTTGTTTGTTGATGCCATCATAGGTTGCTGGAGTCATCGAAAGGGTTTGCAATGACGGAGTTGTGGATGAGGATGAAGAGAGGCAGGTGAGCAAGGAAGTCGAGAAGGTCGAGAGAGTGCAGATTGCGAAGTTCGCGTCTCACCGAAGCCTCATGTTCTGGCCTGATGCCTCCTGCCTTGAGCTCCATCAGCAGCTGCTCAGCCTCAATGCAGCCCTCTGGTGCCACAGTGCCCCCTGTCTGAGCCTCCAGCAGGAACAAGAATAACTGCTGCAGAACGAGCACACATTCTCAGACTCTTGTCTAGTCTGGACTCCATGCAGTGATTGGTCAACTTCTCGTTAATGGTCGCGTGGGGCAACGAGGACTTCATCTGGGGCAAACAAGAGAAAGTGGAAGGAAGCTGGTTTAGGATCATTCAGCGTCCTCCTTATCTGTAACCTTCAAGAAGAGCTGCATAAAATGGCTAATGTTGATGATGCTCGGGAAGAGTTGGACTCGGTGGAGGCAGAGCTGGAGATGGTGGAATTGCAGATCTCTGAGTTACTGGAGAAACAGACGAGGCTAAACTCCAGGAAGAACAAACTACTGAAGGTCTTGGAGGGAGCATGCAGCTCAGCCCAGCCTTCCGGATCCGGCAAAACTCCCAAATCTTCATTCAGCAAACAGGACCTTCAACACTATGAAGACTCTGATTTCTCTTGGTCTAAAGAAGTTCAGGTGAATCTATGTAACATATTCCAGCTTTCCAAATTTCGCCCTCTGCAACGAGCGGCCATCAATCTGAGCATGTCAGGGAAAGATCTTTTCCTGGTAATGCCCACCGGTCGAGGAAAAAGCTTATGTTACCAGCTGCCAGCCCTCTGCTCTAAAGGTTTCACATTAGTTATCGCCCCACTGGTGTCTCTGATGGAGGATCAGCTGATGTATCTGCAGTCCGTTAATGTACCAGCAGTGACTCTCAATGCCTCCAGTTCAAAGGAGGACTCTAAAAGGATTTTGGCAGGGATGACGGATAAAAATAGCCCCTTCAAATTGCTCTATGTAACCCCAGAGAAAATCGCTAAGAGCAAACTACTGATGTCCAAACTGGAAAAGGCCTTTAACATGGGTCTGCTGGCACGCATTGCAGTAGATGAAGTTCATTGCTGTAGTCAATGGGGCCATGACTTTAGGCCGGGTGAGATTTTGTTTTATCTAGACAGAGTGAAGCTTCTTAATCCAAAGCTGACTATGCTGTTTTTTTCCTTAGATTACAAACTCTTGGGTATCCTAAAGAGGCAGTTCCCTAATGTCCCATTAATCGGACTGACTGCCACTGCTACTAGCAACGTTCTTAAAGACTGCCAGAAGATCCTGTGCGTTCAGGAACCCGTTACACTTACAGCACCGTTCAACAGACCAAACCTTTACTATGAGGTTCGTTTTAAGGATAACGAAGACTGCACTGATCAAATTGCATCACTGATCAGAGGGAGATACAAAAACCAATCAGGGATTGTATATGTGTTCTCTCAGAAAGATGCAGAAGTTGTAGCTACAGAGCTGCAGAAGCGGGATATTGTTGCACAGCCATATCATGCCAACATGGAGCCTTCGCACAAGTCTCTGGTGCATCAGCGATGGTCCTCCAAGAAAATCCAGGTGGTTGTTGCCACTGTGGCTTTTGGGATGGGCATCGACAAGGCTGACGTACGATTTGTAATCCATCACACCATCAGTAAATCTATCGAAAATTACTATCAGGAAAGTGGACGTGCAGgaaGGGATGATAGCCCTGCAGATTGTATTGTGTTTTTTGGGTTTATGGACATCTTTAGGATAAGCACAATGGTTGTGATGGAGAACACTGGACAGCAGAAGCTCCATAATATGGTGGCATATTGTCAAAATGTGGACAGGTGTCGTCGTGCTATGATGGCCATTCATTTTGATGAAGTTTGGAATGATGAAGAGTGCAATGAAATGTGTGATGTCTGTCGGCATGGCAACGACTACATCACAATGGACATCACGCAACATGCTCGAGATGTTCTTCATATTGTAGAATTGGCCAGCTCTATGGATGAAAAGTTGACACCTCTGAAAGTCTGTGATGCTTGGCTGGGGAAAGGGCCCGCCAAGCAGCGCAAAATGATAAAGCTCACATCCCTGTCACGCCTGGAGGTGGAGTCTGTTATCATCCACCTTTTGTTGCATGGCTACTTCAGTGAGGACTTCAGCTTCACTCCCTACACAACACACTTCTACCTGAAGCTGGGTCGTAAGGCAGCCCTCCTGAAGAACAGCGGTCACTCCATCACTATGAAGATGAGGAGGAGAGGGACGTCCCAGAGTACTGTAAAGAAAGTTTCAGAAAGTTCTGGGGAGAAAAGTAGATCCAAAGTAGAAGGAAAAAGACCGGCTGAAAGTGGCGACCAAAAATCAGCCAAGAAAGTCAAGCCTCTTCCCTAG
>TCONS_00053693
ACTAGGAAGGTGTGTGGAgttatattacatttttctttacttCTCATCACGACTACAGGTCAATCACGATTAAATGTAGTCAATAATGCATTTCTAGGACGATGCAATGTGAGTAGTAcagttatttttctttattttcccatTGAACAAGACTCTTGTCTAGTCTGGACTCCATGCAGTGATTGGTCAACTTCTCGTTAATGGTCGCGTGGGGCAACGAGGACTTCATCTGGGGCAAACAAGAGAAAGTGGAAGGAAGCTGGTTTAGGATCATTCAGCGTCCTCCTTATCTGTAACCTTCAAGAAGAGCTGCATAAAATGGCTAATGTTGATGATGCTCGGGAAGAGTTGGACTCGGTGGAGGCAGAGCTGGAGATGGTGGAATTGCAGATCTCTGAGTTACTGGAGAAACAGACGAGGCTAAACTCCAGGAAGAACAAACTACTGAAGGTCTTGGAGGGAGCATGCAGCTCAGCCCAGCCTTCCGGATCCGGCAAAACTCCCAAATCTTCATTCAGCAAACAGGACCTTCAACACTATGAAGACTCTGATTTCTCTTGGTCTAAAGAAGTTCAGGTGAATCTATGTAACATATTCCAGCTTTCCAAATTTCGCCCTCTGCAACGAGCGGCCATCAATCTGAGCATGTCAGGGAAAGATCTTTTCCTGGTAATGCCCACCGGTCGAGGAAAAAGCTTATGTTACCAGCTGCCAGCCCTCTGCTCTAAAGGTTTCACATTAGTTATCGCCCCACTGGTGTCTCTGATGGAGGATCAGCTGATGTATCTGCAGTCCGTTAATGTACCAGCAGTGACTCTCAATGCCTCCAGTTCAAAGGAGGACTCTAAAAGGATTTTGGCAGGGATGACGGATAAAAATAGCCCCTTCAAATTGCTCTATGTAACCCCAGAGAAAATCGCTAAGAGCAAACTACTGATGTCCAAACTGGAAAAGGCCTTTAACATGGGTCTGCTGGCACGCATTGCAGTAGATGAAGTTCATTGCTGTAGTCAATGGGGCCATGACTTTAGGCCGGATTACAAACTCTTGGGTATCCTAAAGAGGCAGTTCCCTAATGTCCCATTAATCGGACTGACTGCCACTGCTACTAGCAACGTTCTTAAAGACTGCCAGAAGATCCTGTGCGTTCAGGAACCCGTTACACTTACAGCACCGTTCAACAGACCAAACCTTTACTATGAGGTTCGTTTTAAGGATAACGAAGACTGCACTGATCAAATTGCATCACTGATCAGAGGGAGATACAAAAACCAATCAGGGATTGTATATGTGTTCTCTCAGAAAGATGCAGAAGTTGTAGCTACAGAGCTGCAGAAGCGGGATATTGTTGCACAGCCATATCATGCCAACATGGAGCCTTCGCACAAGTCTCTGGTGCATCAGCGATGGTCCTCCAAGAAAATCCAGGTGGTTGTTGCCACTGTGGCTTTTGGGATGGGCATCGACAAGGCTGACGTACGATTTGTAATCCATCACACCATCAGTAAATCTATCGAAAATTACTATCAGGAAAGTGGACGTGCAGgaaGGGATGATAGCCCTGCAGATTGTATTGTGTTTTTTGGGTTTATGGACATCTTTAGGATAAGCACAATGGTTGTGATGGAGAACACTGGACAGCAGAAGCTCCATAATATGGTGGCATATTGTCAAAATGTGGACAGGTGTCGTCGTGCTATGATGGCCATTCATTTTGATGAAGTTTGGAATGATGAAGAGTGCAATGAAATGTGTGATGTCTGTCGGCATGGCAACGACTACATCACAATGGACATCACGCAACATGCTCGAGATGTTCTTCATATTGTAGAATTGGCCAGCTCTATGGATGAAAAGTTGACACCTCTGAAAGTCTGTGATGCTTGGCTGGGGAAAGGGCCCGCCAAGCAGCGCAAAATGATAAAGCTCACATCCCTGTCACGCCTGGAGGTGGAGTCTGTTATCATCCACCTTTTGTTGCATGGCTACTTCAGTGAGGACTTCAGCTTCACTCCCTACACAACACACTTCTACCTGAAGCTGGGTCGTAAGGCAGCCCTCCTGAAGAACAGCGGTCACTCCATCACTATGAAGATGAGGAGGAGAGGGACGTCCCAGAGTACTGTAAAGAAAGTTTCAGAAAGTTCTGGGGAGAAAAGTAGATCCAAAGTAGAAGGAAAAAGACCGGCTGAAAGTGGCGACCAAAAATCAGCCAAGAAAGTCAAGCCTCTTCCCTAGTTCATAAGGAGGAGAACCAAAAAgATGTCCACGACGACATAGAAACGGCCTTCATTGATGAGTCAAACATGGCTGTTC
>TCONS_00053694
ACTAGGAAGGTGTGTGGAgttatattacatttttctttacttCTCATCACGACTACAGGTCAATCACGATTAAATGTAGTCAATAATGCATTTCTAGGACGATGCAATGTGAGTAGTAcagttatttttctttattttcccatTGAACAAGACTCTTGTCTAGTCTGGACTCCATGCAGTGATTGGTCAACTTCTCGTTAATGGTCGCGTGGGGCAACGAGGACTTCATCTGGGGCAAACAAGAGAAAGTGGAAGGAAGCTGGTTTAGGATCATTCAGCGTCCTCCTTATCTGTAACCTTCAAGAAGAGCTGCATAAAATGGCTAATGTTGATGATGCTCGGGAAGAGTTGGACTCGGTGGAGGCAGAGCTGGAGATGGTGGAATTGCAGATCTCTGAGTTACTGGAGAAACAGACGAGGCTAAACTCCAGGAAGAACAAACTACTGAAGGTCTTGGAGGGAGCATGCAGCTCAGCCCAGCCTTCCGGATCCGGCAAAACTCCCAAATCTTCATTCAGCAAACAGGACCTTCAACACTATGAAGACTCTGATTTCTCTTGGTCTAAAGAAGTTCAGGTGAATCTATGTAACATATTCCAGCTTTCCAAATTTCGCCCTCTGCAACGAGCGGCCATCAATCTGAGCATGTCAGGGAAAGATCTTTTCCTGGTAATGCCCACCGGTCGAGGAAAAAGCTTATGTTACCAGCTGCCAGCCCTCTGCTCTAAAGGTTTCACATTAGTTATCGCCCCACTGGTGTCTCTGATGGAGGATCAGCTGATGTATCTGCAGTCCGTTAATGTACCAGCAGTGACTCTCAATGCCTCCAGTTCAAAGGAGGACTCTAAAAGGATTTTGGCAGGGATGACGGATAAAAATAGCCCCTTCAAATTGCTCTATGTAACCCCAGAGAAAATCGCTAAGAGCAAACTACTGATGTCCAAACTGGAAAAGGCCTTTAACATGGGTCTGCTGGCACGCATTGCAGTAGATGAAGTTCATTGCTGTAGTCAATGGGGCCATGACTTTAGGCCGGATTACAAACTCTTGGGTATCCTAAAGAGGCAGTTCCCTAATGTCCCATTAATCGGACTGACTGCCACTGCTACTAGCAACGTTCTTAAAGACTGCCAGAAGATCCTGTGCGTTCAGGAACCCGTTACACTTACAGCACCGTTCAACAGACCAAACCTTTACTATGAGGTTCGTTTTAAGGATAACGAAGACTGCACTGATCAAATTGCATCACTGATCAGAGGGAGATACAAAAACCAATCAGGGATTGTATATGTGTTCTCTCAGAAAGATGCAGAAGTTGTAGCTACAGAGCTGCAGAAGCGGGATATTGTTGCACAGCCATATCATGCCAACATGGAGCCTTCGCACAAGTCTCTGGTGCATCAGCGATGGTCCTCCAAGAAAATCCAGGTGGTTGTTGCCACTGTGGCTTTTGGGATGGGCATCGACAAGGCTGACGTACGATTTGTAATCCATCACACCATCAGTAAATCTATCGAAAATTACTATCAGGAAAGTGGACGTGCAGgaaGGGATGATAGCCCTGCAGATTGTATTGTGTTTTTTGGGTTTATGGACATCTTTAGGATAAGCACAATGGTTGTGATGGAGAACACTGGACAGCAGAAGCTCCATAATATGGTGGCATATTGTCAAAATGTGGACAGGCAACGTCGTGCTATGATGGCCATTCATTTTGATGAAGTTTGGAATGATGAAGAGTGCAATGAAATGTGTGATGTCTGTCGGCATGGCAACGACTACATCACAATGGACATCACGCAACATGCTCGAGATGTTCTTCATATTGTAGAATTGGCCAGCTCTATGGATGAAAAGTTGACACCTCTGAAAGTCTGTGATGCTTGGCTGGGGAAAGGGCCCGCCAAGCAGCGCAAAATGATAAAGCTCACATCCCTGTCACGCCTGGAGGTGGAGTCTGTTATCATCCACCTTTTGTTGCATGGCTACTTCAGTGAGGACTTCAGCTTCACTCCCTACACAACACACTTCTACCTGAAGCTGGGTCGTAAGGCAGCCCTCCTGAAGAACAGCGGTCACTCCATCACTATGAAGATGAGGAGGAGAGGGACGTCCCAGAGTACTGTAAAGAAAGTTTCAGAAAGTTCTGGGGAGAAAAGTAGATCCAAAGTAGAAGGAAAAAGACCGGCTGAAAGTGGCGACCAAAAATCAGCCAAGAAAGTCAAGCCTCTTCCCTAGTTCATAAGGAGGAGAACCAAAAAgATGTCCACGACGACATAGAAACGGCCTTCATTGATGAGTCAAACATGGCTGTTCAAAgatgtaaaaaaactaaaattcacaAAAATCACCAAAACATGGAGAAAAGACTTTCTCAAAACCACACTGAAAGTCTTGCTTCAGAAGCAAGCGAGTATATAAAGCCAACCTCAGTATTTGAGGTTGATGTAGAGGTCAACCATGTGGAAGAACAGAATTGTACAAGTCAAGACGAAAATGGTCTTGAAAGCACCCACGAACAGCAACAATCTCCActaaaaaagagacaaaaacagAACTGCGCTCCTAATGTTGACCAGGCAAAAGTAAATCTGGAAAGCGCTCCTTCTGAGCTCTCCATCATCTCTGCAGCTGCCGTAGAGGAACTGCACCATTTGCGCAGCTACTATAGCAAGCAGTTACGAAGGATCAACTACGTTTCCCATGAGCACTTGCAAAGCTCCCGGCCTGGGATGCTGACATGTATGAAAGAGCCCTTCAAAAGCCTCCGTTTCCCATCAAGGTCGACTTTAACCAAAGGTGCCAGGAATTTGTGGACTCGTGTTAGTATGAGGAGAAAGCTCATACAGTGAATCGTGTTTCTGTTATCGTTACtcttcagttttttgttttttttctgatttgcttTTCAGTAGTTTGAAGATATATCAAATGTTTTTGTCAATTAAACTTTATTTGGTTATCCAAA

Function

symbol description
recql Predicted to enable 3'-5' DNA helicase activity; ATP-dependent DNA/DNA annealing activity; and four-way junction helicase activity. Predicted to be involved in DNA unwinding involved in DNA replication and double-strand break repair via homologous recombination. Predicted to act upstream of or within DNA replication. Predicted to be located in nucleus. Predicted to be active in chromosome and cytoplasm. Is expressed in basal plate midbrain region; central nervous system; and presumptive diencephalon. Human ortholog(s) of this gene implicated in hepatocellular carcinoma; lung cancer; and pancreatic cancer. Orthologous to human RECQL (RecQ like helicase).

GO:

id name namespace
GO:0006310 DNA recombination biological_process
GO:0032508 DNA duplex unwinding biological_process
GO:0000724 double-strand break repair via homologous recombination biological_process
GO:0006260 DNA replication biological_process
GO:0006268 DNA unwinding involved in DNA replication biological_process
GO:0006281 DNA repair biological_process
GO:0005634 nucleus cellular_component
GO:0005694 chromosome cellular_component
GO:0005737 cytoplasm cellular_component
GO:0036310 annealing helicase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003678 DNA helicase activity molecular_function
GO:0009378 four-way junction helicase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0043138 3'-5' DNA helicase activity molecular_function
GO:0004386 helicase activity molecular_function

KEGG:

id description
ko03400 DNA repair and recombination proteins

ZFIN:

id description
ZDB-GENE-050809-134 Predicted to enable 3'-5' DNA helicase activity; ATP-dependent DNA/DNA annealing activity; and four-way junction helicase activity. Predicted to be involved in DNA unwinding involved in DNA replication and double-strand break repair via homologous recombination. Predicted to act upstream of or within DNA replication. Predicted to be located in nucleus. Predicted to be active in chromosome and cytoplasm. Is expressed in basal plate midbrain region; central nervous system; and presumptive diencephalon. Human ortholog(s) of this gene implicated in hepatocellular carcinoma; lung cancer; and pancreatic cancer. Orthologous to human RECQL (RecQ like helicase).

Ensembl:

ensembl_id ENSDARG00000007175

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053692 False 2621 mRNA 0.45 16 17424855 17536242
TCONS_00053691 False 2693 mRNA 0.45 15 17424855 17536242
TCONS_00053693 False 2316 mRNA 0.46 16 17524330 17537618
TCONS_00053694 True 2968 mRNA 0.44 16 17524330 17538270

Neighbor

gene id symbol gene type direction distance location
XLOC_027265 ascl1a coding upstream 5662 17417111 ~ 17419193 (+)
XLOC_027263 nup37 coding upstream 47197 17327704 ~ 17377658 (+)
XLOC_027264 pmch coding upstream 86102 17336557 ~ 17338753 (+)
XLOC_027262 igf1 coding upstream 98138 17310143 ~ 17326717 (+)
XLOC_027261 bcat1 coding upstream 127435 17279966 ~ 17297420 (+)
XLOC_027268 itfg2 coding downstream 864 17539134 ~ 17553996 (+)
XLOC_027269 NA coding downstream 94382 17632652 ~ 17636109 (+)
XLOC_027270 cwf19l1 coding downstream 104461 17642731 ~ 17653566 (+)
XLOC_027271 washc3 coding downstream 117602 17655872 ~ 17662078 (+)
XLOC_027272 gnptab coding downstream 132894 17671164 ~ 17705108 (+)
XLOC_027259 NA non-coding upstream 329735 17090696 ~ 17095120 (+)
XLOC_027258 CR792413.1 non-coding upstream 362758 17061980 ~ 17062097 (+)
XLOC_027257 NA non-coding upstream 439572 16981419 ~ 16985283 (+)
XLOC_027256 NA non-coding upstream 457928 16964303 ~ 16966927 (+)
XLOC_027254 NA non-coding upstream 580150 16839553 ~ 16844705 (+)
XLOC_027273 NA non-coding downstream 253347 17791617 ~ 17823782 (+)
XLOC_027275 NA non-coding downstream 784102 18322372 ~ 18348961 (+)
XLOC_027276 NA non-coding downstream 802028 18340298 ~ 18343357 (+)
XLOC_027277 BX649398.2 non-coding downstream 881272 18419542 ~ 18434077 (+)

Expression


Co-expression Network