Gene
RNA
| Item | Value |
|---|---|
| gene id | G830957 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 64735902 ~ 64736990 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU944831 | True | 1089 | lncRNA | 0.39 | 1 | 64735902 | 64736990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532663 | LOC106572586 | coding | upstream | 235102 | 64494767 ~ 64500800 (+) |
| LOC110532661 | LOC106572584 | coding | upstream | 245698 | 64482555 ~ 64490204 (+) |
| LOC110516183 | LOC106572588 | coding | upstream | 282432 | 64443372 ~ 64453470 (+) |
| LOC110532652 | LOC106572590 | coding | upstream | 422928 | 64308634 ~ 64312974 (+) |
| LOC110532654 | LOC106572591 | coding | upstream | 427339 | 64280572 ~ 64308563 (+) |
| LOC110532676 | LOC106572538 | coding | downstream | 110755 | 64847745 ~ 64869558 (+) |
| LOC110532678 | LOC106572653 | coding | downstream | 276887 | 65013877 ~ 65041263 (+) |
| LOC110532679 | LOC106572652 | coding | downstream | 315614 | 65052604 ~ 65061874 (+) |
| LOC110532681 | LOC106572651 | coding | downstream | 327483 | 65064473 ~ 65073406 (+) |
| LOC110532682 | LOC106572650 | coding | downstream | 340455 | 65077445 ~ 65135899 (+) |
| G830968 | hoxc10ab | non-coding | upstream | 4850 | 64729538 ~ 64731052 (+) |
| G830967 | NA | non-coding | upstream | 7133 | 64728562 ~ 64728769 (+) |
| G830962 | NA | non-coding | upstream | 11548 | 64724141 ~ 64724354 (+) |
| G830952 | NA | non-coding | upstream | 21072 | 64714601 ~ 64714830 (+) |
| G830938 | hoxc6ab | non-coding | upstream | 41673 | 64692255 ~ 64694229 (+) |
| G830981 | NA | non-coding | downstream | 16197 | 64753187 ~ 64753420 (+) |
| G830989 | NA | non-coding | downstream | 25599 | 64762589 ~ 64762834 (+) |
| G830991 | NA | non-coding | downstream | 27744 | 64764734 ~ 64765126 (+) |
| G831272 | NA | non-coding | downstream | 68541 | 64805531 ~ 64805753 (+) |
| G831281 | NA | non-coding | downstream | 75665 | 64812655 ~ 64812868 (+) |
| G830923 | NA | other | upstream | 69591 | 64665748 ~ 64666311 (+) |
| G830755 | gp182 | other | upstream | 419246 | 64314078 ~ 64316656 (+) |
| LOC110532619 | LOC106572645 | other | upstream | 1138134 | 63565578 ~ 63601970 (+) |
| LOC110532602 | NA | other | upstream | 2108060 | 62623239 ~ 62627845 (+) |
| G828274 | NA | other | upstream | 2545296 | 62189182 ~ 62190606 (+) |
| G831299 | LOC100653477 | other | downstream | 142717 | 64879707 ~ 64883543 (+) |
| LOC110531237 | LOC106567057 | other | downstream | 629301 | 65186569 ~ 65405501 (+) |
| G831810 | NA | other | downstream | 777403 | 65514393 ~ 65514985 (+) |
| G831865 | NA | other | downstream | 885948 | 65622938 ~ 65623316 (+) |
| LOC110532705 | LOC106567051 | other | downstream | 932439 | 65669353 ~ 65671483 (+) |
