G830989



Basic Information


Item Value
gene id G830989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 64762589 ~ 64762834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU944868
ATGCAGTACAACAACATAAATGTTATTATATGTTATGAGTCTAACTACAGCCGTCTGAGCACTGTGGGAGATCACTTGGTATCGGGTTAGTTCACAACCTCTCATGTTCTTAATTACGACATAGTAATCCATTCTAGGAAAAGTTGCCAAAGCAAAAAATTTAATTACAAGACGAGATAATGTCTGTAACCATGTAATGAAAAGTCCATGACCATTTTCAAAGTAGAGCTTTAATTATCGATATAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU944868 True 246 lncRNA 0.34 1 64762589 64762834

Neighbor


gene id symbol gene type direction distance location
LOC110532663 LOC106572586 coding upstream 261789 64494767 ~ 64500800 (+)
LOC110532661 LOC106572584 coding upstream 272385 64482555 ~ 64490204 (+)
LOC110516183 LOC106572588 coding upstream 309119 64443372 ~ 64453470 (+)
LOC110532652 LOC106572590 coding upstream 449615 64308634 ~ 64312974 (+)
LOC110532654 LOC106572591 coding upstream 454026 64280572 ~ 64308563 (+)
LOC110532676 LOC106572538 coding downstream 84911 64847745 ~ 64869558 (+)
LOC110532678 LOC106572653 coding downstream 251043 65013877 ~ 65041263 (+)
LOC110532679 LOC106572652 coding downstream 289770 65052604 ~ 65061874 (+)
LOC110532681 LOC106572651 coding downstream 301639 65064473 ~ 65073406 (+)
LOC110532682 LOC106572650 coding downstream 314611 65077445 ~ 65135899 (+)
G830981 NA non-coding upstream 9169 64753187 ~ 64753420 (+)
G830957 NA non-coding upstream 25599 64735902 ~ 64736990 (+)
G830968 hoxc10ab non-coding upstream 31537 64729538 ~ 64731052 (+)
G830967 NA non-coding upstream 33820 64728562 ~ 64728769 (+)
G830962 NA non-coding upstream 38235 64724141 ~ 64724354 (+)
G830991 NA non-coding downstream 1900 64764734 ~ 64765126 (+)
G831272 NA non-coding downstream 42697 64805531 ~ 64805753 (+)
G831281 NA non-coding downstream 49821 64812655 ~ 64812868 (+)
G831334 NA non-coding downstream 165331 64928165 ~ 64928875 (+)
G831443 NA non-coding downstream 224295 64987129 ~ 64987417 (+)
G830923 NA other upstream 96278 64665748 ~ 64666311 (+)
G830755 gp182 other upstream 445933 64314078 ~ 64316656 (+)
LOC110532619 LOC106572645 other upstream 1164821 63565578 ~ 63601970 (+)
LOC110532602 NA other upstream 2134747 62623239 ~ 62627845 (+)
G828274 NA other upstream 2571983 62189182 ~ 62190606 (+)
G831299 LOC100653477 other downstream 116873 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 603457 65186569 ~ 65405501 (+)
G831810 NA other downstream 751559 65514393 ~ 65514985 (+)
G831865 NA other downstream 860104 65622938 ~ 65623316 (+)
LOC110532705 LOC106567051 other downstream 906595 65669353 ~ 65671483 (+)

Expression



Co-expression Network