Gene
RNA
| Item | Value |
|---|---|
| gene id | G831385 |
| gene name | LOC106572538 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 64856223 ~ 64858582 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU945348 | True | 391 | lncRNA | 0.54 | 2 | 64856223 | 64858582 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533032 | hoxc13ab | coding | downstream | 83318 | 64768591 ~ 64772905 (-) |
| LOC110532675 | hoxc12ab | coding | downstream | 95562 | 64756584 ~ 64760661 (-) |
| LOC110532674 | hoxc11ab | coding | downstream | 111246 | 64741165 ~ 64744977 (-) |
| LOC110532669 | hoxc9ab | coding | downstream | 135828 | 64716626 ~ 64720395 (-) |
| LOC110532670 | hoxc8ab | coding | downstream | 142479 | 64710256 ~ 64713744 (-) |
| LOC110532677 | LOC106567065 | coding | upstream | 21117 | 64879699 ~ 64985955 (-) |
| LOC110532684 | LOC106567062 | coding | upstream | 238039 | 65096621 ~ 65131339 (-) |
| LOC110532685 | NA | coding | upstream | 548331 | 65406913 ~ 65498864 (-) |
| LOC110531238 | LOC106572666 | coding | upstream | 640898 | 65499480 ~ 65538745 (-) |
| LOC118966093 | NA | coding | upstream | 688162 | 65546704 ~ 65548816 (-) |
| G831364 | NA | non-coding | downstream | 45040 | 64810973 ~ 64811183 (-) |
| G831258 | NA | non-coding | downstream | 76153 | 64779837 ~ 64780070 (-) |
| G831239 | NA | non-coding | downstream | 105542 | 64750408 ~ 64750681 (-) |
| G831238 | NA | non-coding | downstream | 105901 | 64750105 ~ 64750322 (-) |
| G831231 | NA | non-coding | downstream | 116586 | 64738745 ~ 64739637 (-) |
| G831393 | NA | non-coding | upstream | 7362 | 64865944 ~ 64869519 (-) |
| G831424 | NA | non-coding | upstream | 95626 | 64954208 ~ 64954495 (-) |
| G831541 | NA | non-coding | upstream | 150207 | 65008789 ~ 65009002 (-) |
| G831543 | NA | non-coding | upstream | 151684 | 65010266 ~ 65010489 (-) |
| G831544 | NA | non-coding | upstream | 152120 | 65010702 ~ 65010934 (-) |
| G830543 | LOC108255233 | other | downstream | 815012 | 64027907 ~ 64041211 (-) |
| LOC110532632 | LOC106572615 | other | downstream | 956919 | 63862848 ~ 63899379 (-) |
| G829644 | NA | other | downstream | 2063727 | 62790588 ~ 62792496 (-) |
| tmem269 | pss | other | downstream | 3138258 | 61683104 ~ 61717981 (-) |
| G831986 | NA | other | upstream | 512271 | 65370853 ~ 65413071 (-) |
| G832008 | NA | other | upstream | 555913 | 65414495 ~ 65418096 (-) |
| G832392 | LOC106572669 | other | upstream | 918001 | 65776583 ~ 65781798 (-) |
| G832401 | kmt2d | other | upstream | 935275 | 65793857 ~ 65795190 (-) |
| G832461 | NA | other | upstream | 1087600 | 65946182 ~ 65946593 (-) |
