G831812


Basic Information

Item Value
gene id G831812
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 65515857 ~ 65516872 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU945863
aggagcagtgagagagaggagcaaagagagagaggagcagagagagaggagcagtgtgtgtgtctgttagcgGACTCACCTCACTAGCGAAGTCCGAGTCAGGGGTGGTCTGTTGGGGTCGTGTGGGTTCAGGTTTGGGGGCTCTACCCACTCCCCCGATGGCTACCTCTGACGTGGTACCCCCGTCTCCGTGGCCTGCCCCTGGGCTTGGGAGGTGAGGAGATACGGAACTGGTAAGAGAGGCATCCTCATTTAAATGCAGAACctataacacaggagagagaagagagggagatgctTAGTCAGAACGAAAAACATTAGGACAGGTTATGCCATAACCGTATgcctgtgttctgtgtgtgtctgtgtgttctgtatctctgtgttctgtgtgtctgtgtgttctgtatctctgtgttctgtgtgttctgtatctctgtgttctgtgtgtgtctgtgtgttctgtatctctgtgttctgtgtgtgtctgtgtgttctgtatctctgtgttctgtgtgtgtctgtatcgctgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccatacatgCAGGTATGTGTTTGCATTCTATGTGCGACTGTAGGTGTTTTTTGTGTGCGCGTCGGTGCTTCTGtgtatgcctgtatgtgtgtgtgtgtgggaggggggggggttcccCACCCACCCTCAGAACAGCATTGATATAGATGCGGCCAGAGTTGTCCAGCTGGAACCACTGATCCATGCTGAGGTCAGGACTAGCCAGCAGACGGGTCAGCGGGATGGACAGACTGCCCAGAGACAGAGCCCGGTCATCATCCTTcacctgggagagagggaggaggaggagcaggaggaggtgtaggaggacaggaggtgaaggaggacaggaggggaaggaggaagaggtggagggtggaggggaagaggtgggggaggaggaagaggtggaagaGTGTCAGTAACCACAGTAACAACAGGATTTCTGTAACACTTTG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU945863 True 1016 lncRNA 0.53 1 65515857 65516872
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110531237 LOC106567057 coding upstream 114610 65186569 ~ 65405501 (+)
LOC118966190 NA coding upstream 347427 65166655 ~ 65168430 (+)
LOC110532682 LOC106572650 coding upstream 421712 65077445 ~ 65135899 (+)
LOC110532681 LOC106572651 coding upstream 442451 65064473 ~ 65073406 (+)
LOC110532679 LOC106572652 coding upstream 453983 65052604 ~ 65061874 (+)
LOC110531239 LOC106572674 coding downstream 123753 65640625 ~ 65646547 (+)
LOC110532705 LOC106567051 coding downstream 152481 65669353 ~ 65671483 (+)
LOC118966094 LOC106568803 coding downstream 174444 65691316 ~ 65692849 (+)
LOC110532703 LOC106572667 coding downstream 189556 65706428 ~ 65733828 (+)
LOC110532702 LOC106572671 coding downstream 226296 65743168 ~ 65751861 (+)
G831811 NA non-coding upstream 195 65515386 ~ 65515662 (+)
G831809 NA non-coding upstream 2603 65512840 ~ 65513254 (+)
G831807 NA non-coding upstream 5258 65509838 ~ 65510599 (+)
G831806 NA non-coding upstream 6080 65509464 ~ 65509777 (+)
G831805 NA non-coding upstream 6527 65508839 ~ 65509330 (+)
G831813 NA non-coding downstream 293 65517165 ~ 65517461 (+)
G831814 NA non-coding downstream 3460 65520332 ~ 65520593 (+)
G831815 NA non-coding downstream 4553 65521425 ~ 65521633 (+)
G831816 NA non-coding downstream 5411 65522283 ~ 65522620 (+)
G831818 LOC106572666 non-coding downstream 6823 65523695 ~ 65524392 (+)
G831810 NA other upstream 872 65514393 ~ 65514985 (+)
G831299 LOC100653477 other upstream 632314 64879707 ~ 64883543 (+)
G830923 NA other upstream 849546 64665748 ~ 64666311 (+)
G830755 gp182 other upstream 1199201 64314078 ~ 64316656 (+)
G831865 NA other downstream 106066 65622938 ~ 65623316 (+)
LOC110532701 LOC106572669 other downstream 281505 65754497 ~ 65801814 (+)
G833100 LOC106613929 other downstream 1242406 66759278 ~ 66759673 (+)
G833139 LOC100380641 other downstream 1297592 66814464 ~ 66821639 (+)

Expression

G831812 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.6.
End of interactive chart.

G831812 Expression in each Bioproject

Bar chart with 10 bars.
G831812 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
End of interactive chart.

Co-expression Network