G832357


Basic Information

Item Value
gene id G832357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 65798939 ~ 65800847 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU946487
GGGTTGATAGTTTTTTGCCCCCTATAGTATATAATATACAGTTTGTACACTTTTGCATTTTTCTTACGTGAGGTCAAGGTAGGAGTACAAGTAGAAGGGAGACGTCGTCATGGAGACCTCAGAACCCCCACATACTTTCTTTAAAGATTTACTTTGTTATTAATTTACTTTCATAGAAAAATGCCCTTTTTTTTAACAAGTCTTCCCCTGCCATTTCTTCAAGCCTCCAGTATAGAAGACCGTACTACCACTAAACCAAAATACAGGGACATTTATAAATACACCTAGCTGTGGTGTGGTAAGACAGGCAGGGAAAGACTCACTACAGTAAAGTTTACAACAGTCCACTacatgataaagagaggaagaggctaGATTCATGGTTGATGGTCATTCAAGAAAAGAAAAGATCAAAATGCAGATGGGATTTTAAGGACTAAAAGGTGAAAAACAAATGGGATAGTAGTCTAGTCTTGCATCATTACCAGCAAGCTTTTTGCTTAATGTGTGACTTAAAGGCATTAAGCAGCAAGCGTACATTACATTTCCTTCACTCATTAGTTGGACTTGATCGTCTTGCCAAAGACTTGTTCAATTAGCGGTGTGATCCTGCTTCACTTTACATACTGAAGCTGTGTAAGCAACAATCAttcacaacaatctctccctctcagtcctcAGCAACACAAGGGTGACTGTTATTGTGTCAATTCCCACACAAAGGAAAAACAATAAAAGATACATGGAATCCAGGATGATCAGGAGTCATTTAAAGACACCTATTAAGCTTGTGATTGATCTTAATGCGATGGCTTAATTAATAATAGGATTGTTGGCTAATTATTGTAAAATGATCATCAGCATAGAACAGAGAACAAACCTGCTGTTAGTTAAAGTTTCCCTGCTTGTCTGAGAAGGCTATATACTAATAGtaGCAGTTAACAGTATTTATACAAAGTAAGCAGTCACTTCCCACTAGATTAATGAGGTAGACTGAGGGTCCAACTAACCCACCTTTAAACTCCTTTAGTCAGGACAAGAATAaaacacctgtctgtctggtgCCTCTGGAGCCACAGGTCAACTTTTATAGTATTTGACAGCTTTCTCTTCTGCCTCTCAAGGACACATAGTTCTTCTCTACACACTCAGAGCCACTGTCTTCAGGATTGTCTAGCTAGCCAATAATATCCACTTTGGGAAGTCAATCTTCAATGACGATGGGAACGTGTATTTTCCTTGGGGGTAGGAAGGGGGGAgtgcaggaggaggaggataggtctgcctttttaaaaaaatgCATTCGTTATTTATTAGTACTTAAAATGTCTTCTTTCATCAAAGCTCAAGGTAAGGTCTGCCCTATGAGAGTATTGATATCACATAGAATCTGAACATTTGGTAGATGTGGAGAGGATTGTAATTCCATCCATAGTTACTTAAGGGGTAGGTAGAGGAAAGAGTTGCTTTTGGCAGAGAGGACACAGTTCATCCACAAAAAGACTGTCCCATCATTCGACTGGATGTCAATACAGTTGGTTTGTTTTCTTGTATATCCATAATGCTCTTCAAACCTTTGGCTACAGGTGTGAATGCAAACGTCTTAGTCTTATTCTTTTGGAGGTCAGTTTCCCTCCTCGTTCGTCAGCTTATGAACAGCTTACGAACGAACAGCTTATGTACTGGGTAGTAGTAGCAATATTCTAAAGGCTTTGGCGCAGTAGTGTTCTGGCACCGGGGAGAAAGATACATATTTTTTTTCCCTCTCCATTTCTCACAGTTAGTTCAGTTCATCCACTTTCGGCAATTCCAGGCTCCGCAGTGGCAAGGGATTTTGTGCTGATCGTCCTCAAAGTCAAACTGATAGTCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU946487 True 1870 lncRNA 0.40 2 65798939 65800847

Neighbor

gene id symbol gene type direction distance location
LOC110532704 LOC106592425 coding downstream 116827 65673785 ~ 65682112 (-)
LOC110532706 LOC106572675 coding downstream 163100 65630064 ~ 65635839 (-)
LOC110532689 LOC102781726 coding downstream 178980 65611213 ~ 65619959 (-)
LOC110532688 LOC106572678 coding downstream 193596 65559624 ~ 65605343 (-)
LOC110532687 LOC106572679 coding downstream 239259 65551960 ~ 65559680 (-)
LOC110532699 acv1b coding upstream 1930 65802777 ~ 65827900 (-)
LOC110532700 LOC106567044 coding upstream 28355 65829202 ~ 65875211 (-)
LOC110532698 LOC106572673 coding upstream 82758 65883605 ~ 65893796 (-)
LOC110532695 LOC106572686 coding upstream 243815 66044660 ~ 66047730 (-)
LOC110532694 LOC106572659 coding upstream 280916 66081763 ~ 66104051 (-)
G832396 NA non-coding downstream 9772 65788491 ~ 65789167 (-)
G832372 NA non-coding downstream 46275 65752451 ~ 65752664 (-)
G832369 LOC106572671 non-coding downstream 49463 65749076 ~ 65749476 (-)
G832368 NA non-coding downstream 49889 65748731 ~ 65749050 (-)
G832367 NA non-coding downstream 51409 65747169 ~ 65747530 (-)
G832458 NA non-coding upstream 135573 65936420 ~ 65936806 (-)
G832462 NA non-coding upstream 146671 65947518 ~ 65947761 (-)
G832467 NA non-coding upstream 166005 65966852 ~ 65967113 (-)
G832469 NA non-coding upstream 173405 65974252 ~ 65974699 (-)
G832479 NA non-coding upstream 196961 65997808 ~ 65998029 (-)
G832401 kmt2d other downstream 3749 65793857 ~ 65795190 (-)
G832392 LOC106572669 other downstream 17141 65776583 ~ 65781798 (-)
G832008 NA other downstream 380843 65414495 ~ 65418096 (-)
G831986 NA other downstream 385868 65370853 ~ 65413071 (-)
LOC110532670 hoxc8ab other downstream 1085269 64710256 ~ 64713744 (-)
G832461 NA other upstream 145335 65946182 ~ 65946593 (-)
G832480 LOC106572660 other upstream 200372 66001219 ~ 66001734 (-)
G832503 NA other upstream 235025 66035872 ~ 66036180 (-)
LOC110532692 LOC106572690 other upstream 327069 66127916 ~ 66147685 (-)
LOC110531240 LOC106567037 other upstream 434144 66228457 ~ 66430917 (-)

Expression


Co-expression Network