G832480 (LOC106572660)


Basic Information

Item Value
gene id G832480
gene name LOC106572660
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 66001219 ~ 66001734 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU946633
CCATCTCTTTGTGTGTGATGGGTAGTATAGTGGTGAGGTGGTCCTCTGATCCTAGGGGTCTGCCAAGCCCCAGCCCTCCCAGGCCCAGGCCCAGGCCCAGGTCATGACTCTGCCTAGAAGGGGGAATAGGAGGAGGGGATTTGCTTCCCCCATCCAACTTCCTGACCTGCCGCTCCCCCTTGGAGCTGGCTGAGATGTTGACGGCCCCAGCGCTGAGCTTGCGGACTGGATTGGTCAGCCACTTCTTCAAGGTGCTTACGGAACGTCGCGAGCCTGGGGAGCTGGGGGCAGAGCTACAGGAAACCGTCAGGGTCGGAGGCAGGGACGCCACGGAGGTGGAGATGCTACCCTCGCTGCCTGCAGCCGAGTATgagtctggagggagggagaggagggagggggcaaAGGTCACATAACAGGTCAAGAGAAGAGGAATGATAAACTCTCTAAGTCAACGACTGGGATTTCTCATCTCTCCAGATAGACGAATGGAAGTTTAACTAAGGCAAAGGGCAG

Function

NR:

description
PREDICTED: protein piccolo-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU946633 True 516 TUCP 0.58 1 66001219 66001734

Neighbor

gene id symbol gene type direction distance location
LOC110532698 LOC106572673 coding downstream 107423 65883605 ~ 65893796 (-)
LOC110532700 LOC106567044 coding downstream 126008 65829202 ~ 65875211 (-)
LOC110532699 acv1b coding downstream 173319 65802777 ~ 65827900 (-)
LOC110532704 LOC106592425 coding downstream 319107 65673785 ~ 65682112 (-)
LOC110532706 LOC106572675 coding downstream 365380 65630064 ~ 65635839 (-)
LOC110532695 LOC106572686 coding upstream 42928 66044660 ~ 66047730 (-)
LOC110532694 LOC106572659 coding upstream 80029 66081763 ~ 66104051 (-)
LOC110532692 LOC106572690 coding upstream 126182 66127916 ~ 66147685 (-)
LOC110531240 LOC106567037 coding upstream 226723 66228457 ~ 66430917 (-)
LOC118966098 LOC106567034 coding upstream 520928 66522662 ~ 66543277 (-)
G832479 NA non-coding downstream 3190 65997808 ~ 65998029 (-)
G832469 NA non-coding downstream 26520 65974252 ~ 65974699 (-)
G832467 NA non-coding downstream 34106 65966852 ~ 65967113 (-)
G832462 NA non-coding downstream 53458 65947518 ~ 65947761 (-)
G832458 NA non-coding downstream 64413 65936420 ~ 65936806 (-)
G832481 NA non-coding upstream 1771 66003505 ~ 66003727 (-)
G832484 NA non-coding upstream 11444 66013178 ~ 66013512 (-)
G832486 NA non-coding upstream 13206 66014940 ~ 66015257 (-)
G832490 NA non-coding upstream 22693 66024427 ~ 66024671 (-)
G832492 NA non-coding upstream 24886 66026620 ~ 66027199 (-)
G832461 NA other downstream 54626 65946182 ~ 65946593 (-)
G832401 kmt2d other downstream 206029 65793857 ~ 65795190 (-)
G832392 LOC106572669 other downstream 219421 65776583 ~ 65781798 (-)
G832008 NA other downstream 583123 65414495 ~ 65418096 (-)
G831986 NA other downstream 588148 65370853 ~ 65413071 (-)
G832503 NA other upstream 34138 66035872 ~ 66036180 (-)
G832991 myl6b other upstream 506984 66506278 ~ 66515999 (-)
G833029 NA other upstream 585678 66587412 ~ 66588680 (-)

Expression


Co-expression Network