G832521



Basic Information


Item Value
gene id G832521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 66076323 ~ 66077203 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU946683
GTTAACATTAATAACTTCCATCCATGGGCATCCAACATCAAGTAAGCAAATACCTAGTTTGTTTGGATTGCCCTGTGTTGAACTCCACATAGGGTTTTGCCACAGGGTTTTATCACGTCAAGGTAATAGGATTATGTTGTACAGGGATGGGGAAACTTCAGTCCTCTGGGGCCGGagtggtgtcacacttttcccccatccctagctaaCACAGCTGATGAAAACAATGGCATtttaaactgaagatcatgattagttgatttatTGGAGTGAGGCGTGTTAGCTGGGGCCAAATTGTGGCATcgatcaggcccccgaggactggagttgctgATACCTGGTGTAGCACTATGCAACCTCTAGTCCAGGGCTCGAGGATGTgggggaaacactgctctagactaTGCTGCTACCACTAGAAAGGCCCTGTGACAGCTCAACATCCAGTATGCTAGTGCAGAACGCTCACAGTTCTAGGCCTACTCACAAGATATCAGCCATGTCATTGTTTGAAGACTTCTGAGGCAAATCAAGTACagtatgtgtcacgccctgatctgtttcacctgtctttgggattgtctccacccacctccaggtgtcacctgttttccccattagtccctgggtatttatttctgtgttccctgtttgtctgttgcaagttcgtcttgtcaagtcaaccagcgtgtttttctgTGCGCCTTCTTTTTCTTATcgctcttttgctagtcctccaggtttttgacccttgcctgccttgactctgaacccgcctgtctgaccatactgcctgccctgaccttgagcctgcccgCCACTCTGTACCTCCCGGACTCTGACCttatgatcttttgcctgtccacgaccattctccgagc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU946683 True 881 lncRNA 0.49 1 66076323 66077203

Neighbor


gene id symbol gene type direction distance location
LOC110532695 LOC106572686 coding downstream 28593 66044660 ~ 66047730 (-)
LOC110532698 LOC106572673 coding downstream 182527 65883605 ~ 65893796 (-)
LOC110532700 LOC106567044 coding downstream 201112 65829202 ~ 65875211 (-)
LOC110532699 acv1b coding downstream 248423 65802777 ~ 65827900 (-)
LOC110532704 LOC106592425 coding downstream 394211 65673785 ~ 65682112 (-)
LOC110532694 LOC106572659 coding upstream 4560 66081763 ~ 66104051 (-)
LOC110532692 LOC106572690 coding upstream 50713 66127916 ~ 66147685 (-)
LOC110531240 LOC106567037 coding upstream 151254 66228457 ~ 66430917 (-)
LOC118966098 LOC106567034 coding upstream 445459 66522662 ~ 66543277 (-)
LOC110532712 NA coding upstream 509406 66586609 ~ 66589365 (-)
G832523 NA non-coding downstream 14080 66061968 ~ 66062243 (-)
G832517 NA non-coding downstream 20629 66055397 ~ 66055694 (-)
G832514 NA non-coding downstream 24392 66051256 ~ 66051931 (-)
G832511 NA non-coding downstream 27304 66048794 ~ 66049019 (-)
G832520 NA non-coding upstream 749 66077952 ~ 66081390 (-)
G832532 NA non-coding upstream 31592 66108795 ~ 66109020 (-)
G832549 NA non-coding upstream 70620 66147823 ~ 66148026 (-)
G832562 NA non-coding upstream 83178 66160381 ~ 66160602 (-)
G832565 NA non-coding upstream 85393 66162596 ~ 66162939 (-)
G832503 NA other downstream 40143 66035872 ~ 66036180 (-)
G832480 LOC106572660 other downstream 74589 66001219 ~ 66001734 (-)
G832461 NA other downstream 129730 65946182 ~ 65946593 (-)
G832401 kmt2d other downstream 281133 65793857 ~ 65795190 (-)
G832392 LOC106572669 other downstream 294525 65776583 ~ 65781798 (-)
G832991 myl6b other upstream 431515 66506278 ~ 66515999 (-)
G833029 NA other upstream 510209 66587412 ~ 66588680 (-)
G833521 NA other upstream 1102046 67179249 ~ 67185243 (-)

Expression



Co-expression Network