G832724


Basic Information

Item Value
gene id G832724
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 66224285 ~ 66227110 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU946908
gtggaggagagaagggtggaggagagaaggctAGAAGAGAGAAGGCTGGAAGAGAGAAGGCTGGAAGAGAGAAGggtgggagagagaagggtggattATTTAGGAGGGGATATACTGAGTGCAGAGACTGGAACTGCCCACCTAGGCTAACTGAACTGACGAGGAGTTGAGTGGAGAACCAAAGGAAGAGGAGCCTGCCCTGCTGAACACTGCTTTAACACTATAATACTGAGTACTGAAAAGGCACAAAACAGATGAACAGGGGGAGGTACCACCTGAATTGGCATTTGTTTTCTGTTACAAAACGTTTTGAAACTTTCTGCCCCAATGAACACAACCCTAACAAAGATGTACACTACCCTTCCATGGAGAAGCAATGTGCTCTAATGTCTTACCTCTGTTCGGATATGGCGATGCAATGAGCAATTTGAGCGGAGAGAGTTAACGTGTTATTGTTAAgcgtaaaaaaaatgttttttacattACAGGGATATGTACAGTTAAAATTGATTGGGTTAGGAGTTCTTCCTAATCACAGATGACCTCACCAGGTAAAACTCTGGGTCTTatagtgctttcaagacaactgggaactctggggaaaaatcatgacgtcagtgatcttcaggtcggaaagttggCGCTCTAGAAAGAGGACTGAGTTCCTgaattggaattccgagttggatgacaatTATTTTCCTAATTCCCAGTTATCTTGAAgtgcactgaagtcggaagtctaaGAGTTCCCAGTTTCCatttgttttgaacgtggcattAAGTGTAGCGTAATGCATTTAGTCCTGgtgaggtcacatggtcaggatgAACTTCCTGGCCCTATTCAGTAAACGGAAAATGTGCCTGAAAATATTCCTTTTATGTTCTTCCAGAGAGAAGGAGGCCTTCAGAGGGTATTATAGTAGAGAGCCCCAAtgctaaatggacccctagaccctaCATCCTTTGTATGCATTTGTAGAGATCTCAGCGAATTGGACACATGTAAGTATATGGTAAAAATGCCATCtagtcaatcagtcagccagatGGTGCTCCTACCATACTGCGTATCTACTCATCTAAGATTTCCACAAGCGCCTATGTTGTAGGTGTCCATTTGGGACCGGGGAGAAGGACAATACAAATCCCTTCATATTAAAGAGCGCTAATTTAATGGTAATAATGGCTGTTGTCCTATTCGCTACCCTTCTCCTAAAGTGTGCAATTGTACACTCCCTAACATGGATTTAACAGGAATTGGCTGGTGTAAGGAGCATGGTGGAAACTTGCTTGTACCAATCCAATCCTTATAAGTGCATAAGAGGGAGTGTACACTCGGTAAAGGGTACAGAATCGGAATGAAACCAATCTCTGCTTGGGGAACAGGGTACGTACACGCCAGGTAGCGAGCTGGGATTAAAGTTTATCTGACAAGAGTCGTAGTTTAGTTTGGACTTTTTGTGTTTTTGTTGCATTGTTTAATTTTAATGTGTGAGAAATATGTTGGAGTATTGAGTAATATATCCTGATATGACAGAATATATGATTATATCAATGCCATTACTTAAGAGCTGACTGAGTCAGTTTATCCAACACTTCTCTTTTGAATAAATTGATCTTAATCCTGATCTTAATCTTAAACTTGATCTTGATTTGGTGGGGATGATTTGTAGTGTACTAGGATCAGTGCTCTTGTTCCTGTTGTTGTGTATCGGAAATGGTACCCTATATCCTAcgtgtatatagtgcactaagcccatagggctctggttaaaagtagtgcactatatagggaatagggtaccatttcagaTGCAGACTATGTAATATTGTGCGAGTTGAGACCTCTTCTCCCCATTCCCTACCAATCAGAGACCAGAGAAGCCCTGGCTGGAACAGAAGTGGCCTATCACCATACAAGAGAAAAACCTTAACACAGGCAGGGTGGCCTACCACAATAGAGGAGACAGACCTTAACCCGCCCATGCAGGCTCTAACGTTAGAGATATAAGCTTTTTCAACCTAATATCAACAAACAAATGATCCAACGGACTGATTTAAAGTGTTAGATTCTGCCACTGTTAGATTCATAACGTAGAAATACACGTGCTCATATCATAGTCACCCCAACTGGTACATACATCCTGATTCATTATTCAAAATGTTAAAACGTTTAACGTTAGATCTATTCATGAGAACTATTTTCTGGGCAGGTGTCCTGGTAGCTGTGTGTATGCAGTTAGCCTTATTCCATTCTTCTTATCTCCAGAGGCAAAggatgtgcatcccaaatggcaccatattgcTAATGAACTGCCCtgtgcaaaagtagtgcactacatagggaacagggtgccatttggaatgcattatagcagtgcactttatagggaatagggtgccgtgtgGGATGTACtgaaagtagtggactatatagggaataggattccatttggaatgcattaaagtagtgcactacatagggaatagggtgccatttgggatgcacacagagAAAACTATATATAGAGGCACTGGTGAAACCTTTTCATGTGGAATTGCAGCAATACCCAACTCATACTGGCTAATCTTGTTCATTGCAATAATACAAATCAACCAATAAAATATGTATGTGAGTTCAATATTACAAATGTcatttaaaataaacatttactTTATGAAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU946908 True 2692 lncRNA 0.41 2 66224285 66227110

Neighbor

gene id symbol gene type direction distance location
LOC110532692 LOC106572690 coding downstream 76668 66127916 ~ 66147685 (-)
LOC110532694 LOC106572659 coding downstream 120234 66081763 ~ 66104051 (-)
LOC110532695 LOC106572686 coding downstream 176555 66044660 ~ 66047730 (-)
LOC110532698 LOC106572673 coding downstream 330489 65883605 ~ 65893796 (-)
LOC110532700 LOC106567044 coding downstream 349074 65829202 ~ 65875211 (-)
LOC110531240 LOC106567037 coding upstream 1347 66228457 ~ 66430917 (-)
LOC118966098 LOC106567034 coding upstream 295552 66522662 ~ 66543277 (-)
LOC110532712 NA coding upstream 359499 66586609 ~ 66589365 (-)
LOC110531241 LOC106572714 coding upstream 370090 66597200 ~ 66619536 (-)
l1cama LOC106572712 coding upstream 400810 66627920 ~ 66751125 (-)
G832580 NA non-coding downstream 32891 66190958 ~ 66191394 (-)
G832570 NA non-coding downstream 52408 66171667 ~ 66171877 (-)
G832565 NA non-coding downstream 61346 66162596 ~ 66162939 (-)
G832562 NA non-coding downstream 63683 66160381 ~ 66160602 (-)
G832549 NA non-coding downstream 76259 66147823 ~ 66148026 (-)
G832725 NA non-coding upstream 490 66227600 ~ 66228183 (-)
G832727 NA non-coding upstream 48510 66275620 ~ 66277008 (-)
G832780 NA non-coding upstream 126115 66353225 ~ 66354690 (-)
G832792 NA non-coding upstream 146324 66373434 ~ 66379277 (-)
G832798 NA non-coding upstream 158982 66386092 ~ 66395574 (-)
G832503 NA other downstream 188105 66035872 ~ 66036180 (-)
G832480 LOC106572660 other downstream 222551 66001219 ~ 66001734 (-)
G832461 NA other downstream 277692 65946182 ~ 65946593 (-)
G832401 kmt2d other downstream 429095 65793857 ~ 65795190 (-)
G832991 myl6b other upstream 281608 66506278 ~ 66515999 (-)
G833029 NA other upstream 360302 66587412 ~ 66588680 (-)
G833521 NA other upstream 952139 67179249 ~ 67185243 (-)
LOC110531246 LOC106572701 other upstream 1221341 67327762 ~ 67455661 (-)

Expression


Co-expression Network