G832905


Basic Information

Item Value
gene id G832905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 66597218 ~ 66600114 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU947141
TATTAACTGAAAATAATCAATCCACTGTCAATGGAATACACAACATTTCTGAAGCAGGATTGACCCATAATTGGAGTTACCCCATATGTCTTGGACTGGTTCAAAATAAATGCCATTGGGACACTTTCAAAGCCACTATCAAAAGCAGACATCACTTCCCCAAATCAATGGTACTCAGCTACTAATAACTTTATCACCTAAATAAATTGTCCAAAAGTGATAATACAATTCATGAAGATTGGATGGGAACTTTCTGCTACAGACAGATGTACCTAGACgtgctacagtagaaacacattaCTAGCAAAGCCTAAGGTTATAATTGCTTTTCATTATCATTTTAAAAGTGATGTTCACCAGTTGTCACCTCTATATACGTGATAAAATGATATGGGTCACGCTAATGGAGTTCCATGATTTATCTCATGACAGTTTGTAATGTACTCGATGCCTTTAAAGATCATTAAACAGTATACAATAAGTTGGGTCCTGTGTTTTGCACAGTCATGTGACATGCCTGGATTTTAACCTTCATCTAAAGCTTTTTCAAACTGTCCCCTTTTATTTTAGGTGTAATTCTCATTTCTAGATAACCCTTAAAATACAGGACAAAATCTTGCTATGACACATGATTGCACAAAACACAGGGCCCAAATGTGCATCTGCTCTCTTCATCCACCTGAAACTCGACAGGTTCTCCATCTCCGACACTGAGAAAGGTATTATAGTGTTTTTCTTCAACACTGCAAAAGGTATTTCCTTGGGTTGTTTTTCTTTATGGTCGTACATTGTACAAAAACTACTTATTTGGTGCCATTCCTGTTGGTGAAACCAACTGTAGCCATTCCTGACttgatactacacttgatcttaggcATAAGAGAGAAATGATAACCATAGGCATTGCTGACATTGAACCACATTGTGAAGAAGTGAAACAACCAGAACAACTCAGTTTGGATCCAAGCTAGTTAAActgggggggtggaggggaaTCAGATGACATCCGACTGGCAATGAAGCAGACATCAAATGAGACCTAAGGCTTTTCCACTTCTAACACAAATCACATAATGAAAGTAgcacaaaaaaatgaaaaatgccCAAGCAGGCTTTACTAACCAGGATTTCAGAAACATACATTTCAGTGAGTTAAAAAAAAAGAGATAGAAAACAGGCAGAAACAGCAAGGGACTAGCTGGACTTTAAAAAAACACTAAATTCCATTGTCAGttacaaaatgttttaaaacgttTTCAGTTGCCTGCCCTAAGGAATACAACCATGGTTCAGTTGACCAAGCAGAATGTCAAAATGCCAATGAGTTAAAAGGTATGCCTGTCGTTTAATTTCGCTCCTCTCCTCCGAGTGATGTCCTGCTGGTTGGGGTTCTACTCATTGGGGTTGGGGTTGGCCTCATGGTACACAGACAGGTCAAAGGTTAGTACTTTGCTGATGACGCAATCTCATCCAGAACGAAGAATGGGGCAGGCTTGTAGCTGTGTATGGCGAACAGCAGAGCCAGGGCAGCTACAGTCTTCTCCCCTCCAGACAGGTTGTCCATGGGTCTGAACCTCTTTCCAGGGGCCACACAGTTATAGTTGATCCCATCCAGGTAAGGCTCCTCAGGGTTCTCTGGCCCAAG

Function

NR:

description
hypothetical protein cypCar_00042525, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU947141 True 1645 lncRNA 0.40 2 66597218 66600114

Neighbor

gene id symbol gene type direction distance location
LOC110532711 LOC106572715 coding upstream 3633 66582815 ~ 66593585 (+)
LOC110532709 myl6b coding upstream 81216 66506476 ~ 66516002 (+)
LOC118965939 NA coding upstream 114839 66481679 ~ 66482379 (+)
LOC110532708 LOC106572691 coding upstream 115674 66478086 ~ 66481544 (+)
birc5b LOC106572692 coding upstream 140314 66451326 ~ 66456904 (+)
LOC118966099 NA coding downstream 19451 66615300 ~ 66628653 (+)
LOC110532716 LOC106572708 coding downstream 427915 67028029 ~ 67042094 (+)
LOC110532719 ssrd coding downstream 445083 67045197 ~ 67049885 (+)
LOC110532722 LOC106572704 coding downstream 663450 67263564 ~ 67278303 (+)
LOC110532726 LOC106572718 coding downstream 880238 67480352 ~ 67580588 (+)
G832852 NA non-coding upstream 106329 66490293 ~ 66490889 (+)
G832851 NA non-coding upstream 109762 66486986 ~ 66487456 (+)
G832850 NA non-coding upstream 110966 66486018 ~ 66486252 (+)
G832844 NA non-coding upstream 122628 66474365 ~ 66474590 (+)
G832842 NA non-coding upstream 123627 66473342 ~ 66473591 (+)
G832902 LOC106572714 non-coding downstream 5662 66605776 ~ 66616927 (+)
G832921 LOC106572714 non-coding downstream 17837 66617951 ~ 66618558 (+)
G832930 NA non-coding downstream 40180 66640294 ~ 66640848 (+)
G832938 LOC106572712 non-coding downstream 58410 66658524 ~ 66660256 (+)
LOC110532701 LOC106572669 other upstream 796387 65754497 ~ 65801814 (+)
LOC110532705 LOC106567051 other upstream 925735 65669353 ~ 65671483 (+)
G831865 NA other upstream 973902 65622938 ~ 65623316 (+)
G831810 NA other upstream 1082233 65514393 ~ 65514985 (+)
LOC110531237 LOC106567057 other upstream 1229086 65186569 ~ 65405501 (+)
G833100 LOC106613929 other downstream 159164 66759278 ~ 66759673 (+)
G833139 LOC100380641 other downstream 214350 66814464 ~ 66821639 (+)
G833241 LOC106572720 other downstream 331574 66931688 ~ 66934487 (+)
G833541 NA other downstream 613306 67213420 ~ 67213884 (+)
G833906 LOC100194703 other downstream 1020764 67620878 ~ 67621366 (+)

Expression


Co-expression Network