G833100 (LOC106613929)


Basic Information

Item Value
gene id G833100
gene name LOC106613929
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 66759278 ~ 66759673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU947383
cCCTGAGTACAAGTGGCACCAGACCTCATCAAGTACCTCCTACGCCGTGAGATGGTGAGTTCCGGACTCCTGAAGTTTGATGATCGCCCTGAAAATTATTGGGCATGGAAAGCATCCTTTCTCAATGCGACCAGAGACTTGAATTTATCAGCCAGGGAAGAGTTAGATCTAATTACCAAGTGGCTAGGGGCAGAGTCGTCTGAGCAAGCAATCATAATTAGATCTGTCCATATTTTCAACGCAACAGCAGGGCTTAACATGGTCTGGCAACGACTAGAAGAGTGCTATGGTACACCCGAAGTGATCGAGAATGCACTGTTGAAGAAAATTGATGATTTTCCAAAACTGGCTAACAAAGACAATCACAAACTAAGAGAACTAGGTGACATTCTTCTC

Function

NR:

description
uncharacterized protein LOC110498840

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU947383 True 396 TUCP 0.45 1 66759278 66759673

Neighbor

gene id symbol gene type direction distance location
LOC118966099 NA coding upstream 133453 66615300 ~ 66628653 (+)
LOC110532711 LOC106572715 coding upstream 165693 66582815 ~ 66593585 (+)
LOC110532709 myl6b coding upstream 243276 66506476 ~ 66516002 (+)
LOC118965939 NA coding upstream 276899 66481679 ~ 66482379 (+)
LOC110532708 LOC106572691 coding upstream 277734 66478086 ~ 66481544 (+)
LOC110532716 LOC106572708 coding downstream 268356 67028029 ~ 67042094 (+)
LOC110532719 ssrd coding downstream 285524 67045197 ~ 67049885 (+)
LOC110532722 LOC106572704 coding downstream 503891 67263564 ~ 67278303 (+)
LOC110532726 LOC106572718 coding downstream 720679 67480352 ~ 67580588 (+)
LOC110532729 LOC106572697 coding downstream 848000 67607673 ~ 67618114 (+)
G833099 NA non-coding upstream 370 66758653 ~ 66758908 (+)
G833097 NA non-coding upstream 816 66757948 ~ 66758462 (+)
G832907 LOC106572712 non-coding upstream 8112 66675600 ~ 66751166 (+)
G832939 LOC106572712 non-coding upstream 93471 66660596 ~ 66665807 (+)
G832938 LOC106572712 non-coding upstream 99022 66658524 ~ 66660256 (+)
G833142 NA non-coding downstream 33593 66793266 ~ 66793585 (+)
G833230 NA non-coding downstream 161329 66921002 ~ 66921794 (+)
G833239 LOC106572710 non-coding downstream 166905 66926578 ~ 66927097 (+)
G833240 LOC100846954 non-coding downstream 170018 66929691 ~ 66931359 (+)
G833271 NA non-coding downstream 260684 67020357 ~ 67021927 (+)
LOC110532701 LOC106572669 other upstream 958447 65754497 ~ 65801814 (+)
LOC110532705 LOC106567051 other upstream 1087795 65669353 ~ 65671483 (+)
G831865 NA other upstream 1135962 65622938 ~ 65623316 (+)
G831810 NA other upstream 1244293 65514393 ~ 65514985 (+)
LOC110531237 LOC106567057 other upstream 1391146 65186569 ~ 65405501 (+)
G833139 LOC100380641 other downstream 54791 66814464 ~ 66821639 (+)
G833241 LOC106572720 other downstream 172015 66931688 ~ 66934487 (+)
G833541 NA other downstream 453747 67213420 ~ 67213884 (+)
G833906 LOC100194703 other downstream 861205 67620878 ~ 67621366 (+)
G834099 NA other downstream 1289240 68048913 ~ 68049222 (+)

Expression


Co-expression Network