G833142


Basic Information

Item Value
gene id G833142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 66793266 ~ 66793585 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU947425
ggcctgtacagtttattcagagaaTGTTCTAAAGTCCATAATACAAAGACATGCCATTTTATAACTCACCCCTACCTACCTACTACacgcacatacagacacacaaacagtaggtgggATGTATCTTTCCCCACAGTTCTCACCACTCGTTTATCACTACCAAGATGGCAGTTCCATCCTCCCGAGATTAGAGAGACCTTGACGGGACTCCCTTTCCTACCGTAAGTTTCTCAGAGTTCTAGCCAGGTCAGGTCATACATAGTTTAATTGTTCTCTGTAATTTCTTagtcacacacacatttctacTTGTCTCGACCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU947425 True 320 lncRNA 0.43 1 66793266 66793585

Neighbor

gene id symbol gene type direction distance location
LOC118966099 NA coding upstream 167441 66615300 ~ 66628653 (+)
LOC110532711 LOC106572715 coding upstream 199681 66582815 ~ 66593585 (+)
LOC110532709 myl6b coding upstream 277264 66506476 ~ 66516002 (+)
LOC118965939 NA coding upstream 310887 66481679 ~ 66482379 (+)
LOC110532708 LOC106572691 coding upstream 311722 66478086 ~ 66481544 (+)
LOC110532716 LOC106572708 coding downstream 234444 67028029 ~ 67042094 (+)
LOC110532719 ssrd coding downstream 251612 67045197 ~ 67049885 (+)
LOC110532722 LOC106572704 coding downstream 469979 67263564 ~ 67278303 (+)
LOC110532726 LOC106572718 coding downstream 686767 67480352 ~ 67580588 (+)
LOC110532729 LOC106572697 coding downstream 814088 67607673 ~ 67618114 (+)
G833099 NA non-coding upstream 34358 66758653 ~ 66758908 (+)
G833097 NA non-coding upstream 34804 66757948 ~ 66758462 (+)
G832907 LOC106572712 non-coding upstream 42100 66675600 ~ 66751166 (+)
G832939 LOC106572712 non-coding upstream 127459 66660596 ~ 66665807 (+)
G832938 LOC106572712 non-coding upstream 133010 66658524 ~ 66660256 (+)
G833230 NA non-coding downstream 127417 66921002 ~ 66921794 (+)
G833239 LOC106572710 non-coding downstream 132993 66926578 ~ 66927097 (+)
G833240 LOC100846954 non-coding downstream 136106 66929691 ~ 66931359 (+)
G833271 NA non-coding downstream 226772 67020357 ~ 67021927 (+)
G833307 NA non-coding downstream 273158 67066743 ~ 67067594 (+)
G833100 LOC106613929 other upstream 33593 66759278 ~ 66759673 (+)
LOC110532701 LOC106572669 other upstream 992435 65754497 ~ 65801814 (+)
LOC110532705 LOC106567051 other upstream 1121783 65669353 ~ 65671483 (+)
G831865 NA other upstream 1169950 65622938 ~ 65623316 (+)
G831810 NA other upstream 1278281 65514393 ~ 65514985 (+)
G833139 LOC100380641 other downstream 20879 66814464 ~ 66821639 (+)
G833241 LOC106572720 other downstream 138103 66931688 ~ 66934487 (+)
G833541 NA other downstream 419835 67213420 ~ 67213884 (+)
G833906 LOC100194703 other downstream 827293 67620878 ~ 67621366 (+)
G834099 NA other downstream 1255328 68048913 ~ 68049222 (+)

Expression


Co-expression Network