G833271


Basic Information

Item Value
gene id G833271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67020357 ~ 67021927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU947588
agttTCACACACAGAATACCTCAATATTCTATAGTAAAGATCTGTGTGGCGAAACAAGAGACAACACTCTTTATACAACCTACCGTCAATCATATCTTAACATTGTTGCATTGGATTAGATACAAAGTATCTAAAATTAGAAAAACATGTATAGACTGTGGTTTCTCACTCTACTATCTCGGCCTTGAGGCTGTGTGACTGTCAGCAGGTGCAGACAATTCTCAGCCAGAGAACTAAAGCAGTACATCTCCATTTACCCAGTACTTTTCCATCACTGAGCATTGCAAGCATACAAAGGTCAtcacatatatacagtaatcaTGGCATTGGTGTAGCCCCACATCTGACCCCAGGGTAACCCTCACATAAAAGGTGGTTATTAGCacttggtcccagatctgtttgtgcttctgGCAACTCCATTCCACCTTGTCAAGCCAaatgtttgacatgacaacgagTTGGCATGATggaacaaacagactggcactcaggctagcaCAACTAGATTGAAATCTACAATTTAATATATTAAACTATGcatacaaaatatatattaatGCATTTTAATTTATCATAACATACAATATCCTTCCTAGAACAGCCAGCAATAATATGTTGCTAGTGAATCCTAATTGTATTCTGTTTGCGATTTCCGTTCATATAGGCAGCATTATCTGCCCTCTTCCTGTGCATTTGCAGGGTTTTACAGACATTACTTCtttaatattttctttttttctatccAGCATACATTTTTCCCTTATCTGTGCATCAAACATTTGGTCTCTGAAATATCCATGTCCTCCTACGTGGTCATTCCCAGGAACATCGAGCCTCAAACACTTAAATCAATTCCTAGTTCAAATGTCAAGTCCAAACAGTTGCTTCAACAAGTTAGCATATCAACCATCAGGCCAGCTTGCTACCAGCATTGTGACAGTGAGTCAGTCCACTAAAGAGAAGATGTACTTTGCAGCACGTGTTACTTgacaaaaataacaaaaagtgAAGGGAAAAAAAAGTATTGTAAGAGTCTTTACCTCCCTGTAGTTACATGATATTGTAACAGAGCATCATTTATCCAACTGTAGTCGTGCAATACCAATACCATACTCAAGTCTCATTAATCCTTAAAACCAGAGCCCTTCGTTCTCAAAAGGTGCTAGTCCTTAGAACCAGAGGCCTTCGTTCTCAAAAGGTGCTAGTCCTTAGAACCAGAGGCCTTCGTTCTCAAAAGGTGCTAGTCCTTAGAACCAGAGGCCTTCGTTCTCAAAAGGTTCTAGTCCTTAGAAACAGGTTGCGTTCCAACTCTCCAACCcttctcccaaagtgtgcacttgtctTGCACACTCCCAGTATTTAAAAGCATTGGATCCATGTAGGGCATAAGCATCATCTGAGAagagtggaggaagggagggatacaAGCAGAGTGTGTTTAACCCTCTGAAGGGGAACGGAGGGGGACACAGCCATCCATTTCCAGAGACTCAGGCCAGCCTTCGTACTTGTTACTGTTCTTACTGTTC

Function

NR:

description
protein FAM3A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU947588 True 1532 lncRNA 0.41 2 67020357 67021927

Neighbor

gene id symbol gene type direction distance location
LOC118966099 NA coding upstream 394532 66615300 ~ 66628653 (+)
LOC110532711 LOC106572715 coding upstream 426772 66582815 ~ 66593585 (+)
LOC110532709 myl6b coding upstream 504355 66506476 ~ 66516002 (+)
LOC118965939 NA coding upstream 537978 66481679 ~ 66482379 (+)
LOC110532708 LOC106572691 coding upstream 538813 66478086 ~ 66481544 (+)
LOC110532716 LOC106572708 coding downstream 6102 67028029 ~ 67042094 (+)
LOC110532719 ssrd coding downstream 23270 67045197 ~ 67049885 (+)
LOC110532722 LOC106572704 coding downstream 241637 67263564 ~ 67278303 (+)
LOC110532726 LOC106572718 coding downstream 458425 67480352 ~ 67580588 (+)
LOC110532729 LOC106572697 coding downstream 585746 67607673 ~ 67618114 (+)
G833240 LOC100846954 non-coding upstream 88998 66929691 ~ 66931359 (+)
G833239 LOC106572710 non-coding upstream 93260 66926578 ~ 66927097 (+)
G833230 NA non-coding upstream 98563 66921002 ~ 66921794 (+)
G833142 NA non-coding upstream 226772 66793266 ~ 66793585 (+)
G833099 NA non-coding upstream 261449 66758653 ~ 66758908 (+)
G833307 NA non-coding downstream 44816 67066743 ~ 67067594 (+)
G833311 NA non-coding downstream 54205 67076132 ~ 67080003 (+)
G833335 NA non-coding downstream 99165 67121092 ~ 67121455 (+)
G833471 NA non-coding downstream 115431 67137358 ~ 67137840 (+)
G833487 NA non-coding downstream 129731 67151658 ~ 67152037 (+)
G833241 LOC106572720 other upstream 85870 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 198718 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 260684 66759278 ~ 66759673 (+)
LOC110532701 LOC106572669 other upstream 1219526 65754497 ~ 65801814 (+)
LOC110532705 LOC106567051 other upstream 1348874 65669353 ~ 65671483 (+)
G833541 NA other downstream 191493 67213420 ~ 67213884 (+)
G833906 LOC100194703 other downstream 598951 67620878 ~ 67621366 (+)
G834099 NA other downstream 1026986 68048913 ~ 68049222 (+)
fance fance other downstream 1195151 68213202 ~ 68218960 (+)
G834228 NA other downstream 1246110 68268037 ~ 68268408 (+)

Expression


Co-expression Network