G833439


Basic Information

Item Value
gene id G833439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67073377 ~ 67076686 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU947813
cctatggactagactacatgaggtatgatactgaccttattaaaacatataggcctatgggctagactacatgaggtgtgatactgaccttattaaaacatataggcctatggactagactacatgaggtgtgatactgaccttattaaaacatataggcctatggactagactacatgaggtgtgatactgaccttattaaaacatataggcctatgggctaggctacatgaggtgtgatactgaccttattaaaacatataggcctatgggctaggctacatgaggtatgatactgaccttattaaaacatataggcctatgggctagactacatgaggtatgatactaaccttattaaaacatataggcctatgggctagactacatgaggtgtgatactgaccttattaaaacatataggcctatgggctagactacatgaggtgtgatactgaccttattaaaacatataggcctatggactagactacatgaggtgtgatactgaccttattaaaacatataggcctatgggctaggctacatgaggtgtgatactgaccttattaaaacatataggcctatggactagactacatgaggtgtgatactgaccttattaaaacatataggcctatgggctaggctacatgaggtgtgatactgaccttattaaaacatataggcctatgggctaggctacatgaggtatgatactgaccttattaaaacatataggcctatgggctaggctacatgaggtatgatactgaccttattaaaacatataggcctatgggctagactacatgaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU947813 True 819 lncRNA 0.39 3 67073377 67076686

Neighbor

gene id symbol gene type direction distance location
LOC110532718 fam3a coding downstream 44278 67020315 ~ 67029099 (-)
LOC110532715 LOC106572720 coding downstream 54408 66932925 ~ 67018969 (-)
LOC110532714 LOC106572710 coding downstream 144525 66889894 ~ 66928852 (-)
LOC110531242 LOC100380641 coding downstream 184892 66800041 ~ 66888485 (-)
l1cama LOC106572712 coding downstream 322252 66627920 ~ 66751125 (-)
LOC110532720 LOC106572702 coding upstream 143242 67219928 ~ 67254596 (-)
LOC110532721 LOC106572706 coding upstream 182009 67258695 ~ 67263475 (-)
LOC110532723 LOC106572705 coding upstream 202163 67278849 ~ 67293936 (-)
LOC110532725 LOC106572703 coding upstream 221319 67298005 ~ 67322378 (-)
LOC110531246 LOC106572701 coding upstream 251076 67327762 ~ 67455661 (-)
G833436 NA non-coding downstream 6206 67066540 ~ 67067171 (-)
G833435 NA non-coding downstream 7741 67064403 ~ 67065636 (-)
G833432 NA non-coding downstream 16445 67056718 ~ 67056932 (-)
G833353 NA non-coding downstream 21400 67051538 ~ 67051977 (-)
G833346 ssrd non-coding downstream 22994 67045237 ~ 67050383 (-)
G833490 NA non-coding upstream 76649 67153335 ~ 67153552 (-)
G833531 NA non-coding upstream 114300 67190986 ~ 67191228 (-)
G833699 NA non-coding upstream 132972 67209658 ~ 67210042 (-)
G833700 LOC107756720 non-coding upstream 136523 67213209 ~ 67213959 (-)
G833702 NA non-coding upstream 139716 67216402 ~ 67216671 (-)
G833029 NA other downstream 484697 66587412 ~ 66588680 (-)
G832991 myl6b other downstream 561811 66506278 ~ 66515999 (-)
LOC110531240 LOC106567037 other downstream 642608 66228457 ~ 66430917 (-)
LOC110532692 LOC106572690 other downstream 925692 66127916 ~ 66147685 (-)
G832503 NA other downstream 1037197 66035872 ~ 66036180 (-)
G833521 NA other upstream 102563 67179249 ~ 67185243 (-)
LOC110532727 LOC106572699 other upstream 466464 67543067 ~ 67560577 (-)
LOC110531249 LOC106572727 other upstream 951722 68028408 ~ 68079899 (-)
G834676 NA other upstream 1298972 68375658 ~ 68376157 (-)

Expression


Co-expression Network