G833335


Basic Information

Item Value
gene id G833335
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67121092 ~ 67121455 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU947658
actgtatatactgtatcactcactatctgttattcactatctattgcatcttagccgctctgtcactgttcatctatatattttatacttatatattctcatcccattcctttactagattgtgtgtattaggttttgttgtggaatttgttagatattaggttttgttgtggaattgttagatacgacctgttagatactgctgcactttCAGATCTTGAattataagcatttcactacactcgcaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgtatgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU947658 True 336 lncRNA 0.35 2 67121092 67121455

Neighbor

gene id symbol gene type direction distance location
LOC110532719 ssrd coding upstream 71207 67045197 ~ 67049885 (+)
LOC110532716 LOC106572708 coding upstream 78998 67028029 ~ 67042094 (+)
LOC118966099 NA coding upstream 495267 66615300 ~ 66628653 (+)
LOC110532711 LOC106572715 coding upstream 527507 66582815 ~ 66593585 (+)
LOC110532709 myl6b coding upstream 605090 66506476 ~ 66516002 (+)
LOC110532722 LOC106572704 coding downstream 142109 67263564 ~ 67278303 (+)
LOC110532726 LOC106572718 coding downstream 358897 67480352 ~ 67580588 (+)
LOC110532729 LOC106572697 coding downstream 486218 67607673 ~ 67618114 (+)
tebp tebp coding downstream 500968 67622423 ~ 67625977 (+)
LOC110532731 LOC106572722 coding downstream 596722 67718177 ~ 67755296 (+)
G833311 NA non-coding upstream 41089 67076132 ~ 67080003 (+)
G833307 NA non-coding upstream 53498 67066743 ~ 67067594 (+)
G833271 NA non-coding upstream 99165 67020357 ~ 67021927 (+)
G833240 LOC100846954 non-coding upstream 189733 66929691 ~ 66931359 (+)
G833239 LOC106572710 non-coding upstream 193995 66926578 ~ 66927097 (+)
G833471 NA non-coding downstream 15903 67137358 ~ 67137840 (+)
G833487 NA non-coding downstream 30203 67151658 ~ 67152037 (+)
G833495 NA non-coding downstream 35551 67157006 ~ 67157222 (+)
G833501 NA non-coding downstream 38882 67160337 ~ 67160575 (+)
G833508 NA non-coding downstream 45800 67167255 ~ 67167454 (+)
G833241 LOC106572720 other upstream 186605 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 299453 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 361419 66759278 ~ 66759673 (+)
LOC110532701 LOC106572669 other upstream 1320261 65754497 ~ 65801814 (+)
LOC110532705 LOC106567051 other upstream 1449609 65669353 ~ 65671483 (+)
G833541 NA other downstream 91965 67213420 ~ 67213884 (+)
G833906 LOC100194703 other downstream 499423 67620878 ~ 67621366 (+)
G834099 NA other downstream 927458 68048913 ~ 68049222 (+)
fance fance other downstream 1095623 68213202 ~ 68218960 (+)
G834228 NA other downstream 1146582 68268037 ~ 68268408 (+)

Expression


Co-expression Network