Gene
RNA
| Item | Value |
|---|---|
| gene id | G833541 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 67213420 ~ 67213884 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU947931 | True | 465 | TUCP | 0.52 | 1 | 67213420 | 67213884 |
67,210,800
67,211,200
67,211,600
67,212,000
67,212,400
67,212,800
67,213,200
67,213,200
67,213,600
67,214,000
67,214,400
67,214,800
67,215,200
67,215,600
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532719 | ssrd | coding | upstream | 163535 | 67045197 ~ 67049885 (+) |
| LOC110532716 | LOC106572708 | coding | upstream | 171326 | 67028029 ~ 67042094 (+) |
| LOC118966099 | NA | coding | upstream | 587595 | 66615300 ~ 66628653 (+) |
| LOC110532711 | LOC106572715 | coding | upstream | 619835 | 66582815 ~ 66593585 (+) |
| LOC110532709 | myl6b | coding | upstream | 697418 | 66506476 ~ 66516002 (+) |
| LOC110532722 | LOC106572704 | coding | downstream | 49680 | 67263564 ~ 67278303 (+) |
| LOC110532726 | LOC106572718 | coding | downstream | 266468 | 67480352 ~ 67580588 (+) |
| LOC110532729 | LOC106572697 | coding | downstream | 393789 | 67607673 ~ 67618114 (+) |
| tebp | tebp | coding | downstream | 408539 | 67622423 ~ 67625977 (+) |
| LOC110532731 | LOC106572722 | coding | downstream | 504293 | 67718177 ~ 67755296 (+) |
| G833540 | NA | non-coding | upstream | 814 | 67212328 ~ 67212606 (+) |
| G833516 | NA | non-coding | upstream | 31121 | 67181108 ~ 67182299 (+) |
| G833512 | NA | non-coding | upstream | 44309 | 67168840 ~ 67169111 (+) |
| G833511 | NA | non-coding | upstream | 44633 | 67168432 ~ 67168787 (+) |
| G833508 | NA | non-coding | upstream | 45966 | 67167255 ~ 67167454 (+) |
| G833569 | NA | non-coding | downstream | 44039 | 67257923 ~ 67258123 (+) |
| G833571 | NA | non-coding | downstream | 44856 | 67258740 ~ 67259561 (+) |
| G833573 | LOC107696956 | non-coding | downstream | 46323 | 67260207 ~ 67261100 (+) |
| G833582 | NA | non-coding | downstream | 82075 | 67295959 ~ 67298789 (+) |
| G833588 | NA | non-coding | downstream | 92969 | 67306853 ~ 67307607 (+) |
| G833241 | LOC106572720 | other | upstream | 278933 | 66931688 ~ 66934487 (+) |
| G833139 | LOC100380641 | other | upstream | 391781 | 66814464 ~ 66821639 (+) |
| G833100 | LOC106613929 | other | upstream | 453747 | 66759278 ~ 66759673 (+) |
| LOC110532701 | LOC106572669 | other | upstream | 1412589 | 65754497 ~ 65801814 (+) |
| LOC110532705 | LOC106567051 | other | upstream | 1541937 | 65669353 ~ 65671483 (+) |
| G833906 | LOC100194703 | other | downstream | 406994 | 67620878 ~ 67621366 (+) |
| G834099 | NA | other | downstream | 835029 | 68048913 ~ 68049222 (+) |
| fance | fance | other | downstream | 1003194 | 68213202 ~ 68218960 (+) |
| G834228 | NA | other | downstream | 1054153 | 68268037 ~ 68268408 (+) |
| G834235 | NA | other | downstream | 1073331 | 68287215 ~ 68288525 (+) |
