G833777


Basic Information

Item Value
gene id G833777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67376788 ~ 67378961 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU948220
tgtacgcgcgcTTCGGAGGGGGATAGCACCAAGGCCTTTCCTCTTGGTTCCATGTAGGGACTGAGGTTTGAGAGATTGACCCTGGTTCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCTTAATAAACCACTGAATCTCCCTCCCAATAAACCAGTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCAATAAACCAGTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCTAATAAACCAGTGAACCTCCCTCCTAATAAACCACTGAAAATCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTCCCAATAAACTACTGAATCTCCCTTCTAATAAACCACTGAATCTCCCTCCCAATAAACCAGTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTCCCAATAAACCAGTGAATCTCCCTCCTAATAAACCAGTGCTATTCAAAGCCAGGGTTGCAACCTCTAATGGGAGTAAGAAAGATAATTTTAAAAATAAACTTTATTGACCAAAATGCATGTCTTTATTGGTTCTCTTAATAAGATCATATGTAATGACAATGTAATGAATTtaaggttatttgttgatgttAAAATCAAAATGTACTGATTTGA
>TU948222
tgtacgcgcgcTTCGGAGGGGGATAGCACCAAGGCCTTTCCTCTTGGTTCCATGTAGGGACTGAGGTTTGAGAGATTGACCCTGGTTCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCTTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGAAAATCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCGTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTCCCAATAAACTACTGAATCTCCCTTCTAATAAACCACTGAATCTCCCTCCCAATAAACCAGTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCTAATAAACCAGTGAGCCTCCCTCCTAATAAACCACTGAAAATCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCGAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCAGTGAACCTCCCTCCTAATAAACCACTGAAAATCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCAGTGAACCTCCCTCCTAATAAGCCACTGAATCTCCCTCTTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTCCCAATAAACTACTGAATCTCCCTTCTAATAAACCACTGAATCTCCCTCCCAATAAACCAGTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTCCCAATAAACTACTGAATCTCCCTTCTAATAAACCCACTGAATCTCCCTCCTAATAAACCAGTGAACCTCCCTCCCAATAAACCAGTGAATCTCCCTCCTAATAAACCAGTGCTATTCAAAGCCAGGGTTGCAACCTCTAATGGGAGTAAGAAAGATAATTTTAAAAATAAACTTTATTGACCAAAATGCATGTCTTTATTGGTTCTCTTAATAAGATCATATGTAATGACAATGTAATGAATTtaaggttatttgttgatgttAAAATCAAAATGTACTGATTTGA
>TU948223
tgtacgcgcgcTTCGGAGGGGGATAGCACCAAGGCCTTTCCTCTTGGTTCCATGTAGGGACTGAGGTTTGAGAGATTGACCCTGGTTCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCTTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTCCCAATAAACTACTGAATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCAGTGAACCTCCCTCCTAATAAACCACTGAAAATCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCAGTGAACCTCCCTCCTAATAAGCCACTGAATCTCCCTCTTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCATCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTCCCAATAAACTACTGAATCTCCCTTCTAATAAACCACTGAATCTCCCTCCCAATAAACCAGTGAATCTCCCTCCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCTAATAAACCAGTGAACCTCCCTCCTAATAAACCACTGAAAATCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCCAATAAACCACTGAATCTCCCTCCTAATAAACCACTGCATCTCCCTCCCAATAAACTACTGAATCTCCCTTCTAATAAACCACTGAATCTCCCTCCTAATAAACCCACTGAATCTCCCTCCTAATAAACCAGTGAACCTCCCTCCCAATAAACCAGTGAATCTCCCTCCTAATAAACCAGTGCTATTCAAAGCCAGGGTTGCAACCTCTAATGGGAGTAAGAAAGATAATTTTAAAAATAAACTTTATTGACCAAAATGCATGTCTTTATTGGTTCTCTTAATAAGATCATATGTAATGACAATGTAATGAATTtaaggttatttgttgatgttAAAATCAAAATGTACTGATTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU948220 False 991 lncRNA 0.41 4 67376788 67378961
TU948222 False 1594 lncRNA 0.42 3 67376788 67378961
TU948223 True 1426 lncRNA 0.42 4 67376788 67378961

Neighbor

gene id symbol gene type direction distance location
LOC110532725 LOC106572703 coding downstream 54410 67298005 ~ 67322378 (-)
LOC110532723 LOC106572705 coding downstream 82852 67278849 ~ 67293936 (-)
LOC110532721 LOC106572706 coding downstream 113313 67258695 ~ 67263475 (-)
LOC110532720 LOC106572702 coding downstream 122192 67219928 ~ 67254596 (-)
LOC110531244 LOC106572707 coding downstream 243551 67069316 ~ 67133237 (-)
LOC110532727 LOC106572699 coding upstream 164106 67543067 ~ 67560577 (-)
LOC110532728 LOC106572698 coding upstream 208838 67587799 ~ 67603010 (-)
LOC118966100 NA coding upstream 232171 67611132 ~ 67613318 (-)
LOC110532730 LOC106572695 coding upstream 249776 67628737 ~ 67633978 (-)
LOC110532733 LOC106567001 coding upstream 416096 67795057 ~ 67904020 (-)
G833702 NA non-coding downstream 160117 67216402 ~ 67216671 (-)
G833700 LOC107756720 non-coding downstream 162829 67213209 ~ 67213959 (-)
G833699 NA non-coding downstream 166746 67209658 ~ 67210042 (-)
G833531 NA non-coding downstream 185560 67190986 ~ 67191228 (-)
G833490 NA non-coding downstream 223236 67153335 ~ 67153552 (-)
G833822 NA non-coding upstream 78699 67457660 ~ 67457864 (-)
G833823 NA non-coding upstream 79104 67458065 ~ 67458271 (-)
G833825 NA non-coding upstream 80003 67458964 ~ 67459393 (-)
G834283 NA non-coding upstream 132069 67511030 ~ 67511604 (-)
G834284 NA non-coding upstream 133658 67512619 ~ 67513097 (-)
G833521 NA other downstream 191545 67179249 ~ 67185243 (-)
G833029 NA other downstream 788108 66587412 ~ 66588680 (-)
G832991 myl6b other downstream 865222 66506278 ~ 66515999 (-)
LOC110531240 LOC106567037 other downstream 946019 66228457 ~ 66430917 (-)
LOC110532692 LOC106572690 other downstream 1229103 66127916 ~ 66147685 (-)
LOC110531246 LOC106572701 other upstream 69490 67327762 ~ 67455661 (-)
LOC110531249 LOC106572727 other upstream 649447 68028408 ~ 68079899 (-)
G834676 NA other upstream 996697 68375658 ~ 68376157 (-)
G835608 LOC106572767 other upstream 1600922 68979883 ~ 69058294 (-)

Expression


Co-expression Network