Gene
RNA
| Item | Value |
|---|---|
| gene id | G833676 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 67438915 ~ 67439689 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU948102 | True | 595 | lncRNA | 0.35 | 3 | 67438915 | 67439689 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532722 | LOC106572704 | coding | upstream | 160612 | 67263564 ~ 67278303 (+) |
| LOC110532719 | ssrd | coding | upstream | 389030 | 67045197 ~ 67049885 (+) |
| LOC110532716 | LOC106572708 | coding | upstream | 396821 | 67028029 ~ 67042094 (+) |
| LOC118966099 | NA | coding | upstream | 813090 | 66615300 ~ 66628653 (+) |
| LOC110532711 | LOC106572715 | coding | upstream | 845330 | 66582815 ~ 66593585 (+) |
| LOC110532726 | LOC106572718 | coding | downstream | 40663 | 67480352 ~ 67580588 (+) |
| LOC110532729 | LOC106572697 | coding | downstream | 167984 | 67607673 ~ 67618114 (+) |
| tebp | tebp | coding | downstream | 182734 | 67622423 ~ 67625977 (+) |
| LOC110532731 | LOC106572722 | coding | downstream | 278488 | 67718177 ~ 67755296 (+) |
| LOC110533034 | LOC106572723 | coding | downstream | 328651 | 67768340 ~ 67772836 (+) |
| G833606 | adcy6 | non-coding | upstream | 102713 | 67335437 ~ 67336202 (+) |
| G833600 | NA | non-coding | upstream | 110956 | 67324339 ~ 67327959 (+) |
| G833588 | NA | non-coding | upstream | 131308 | 67306853 ~ 67307607 (+) |
| G833582 | NA | non-coding | upstream | 140126 | 67295959 ~ 67298789 (+) |
| G833573 | LOC107696956 | non-coding | upstream | 177815 | 67260207 ~ 67261100 (+) |
| G833836 | NA | non-coding | downstream | 26978 | 67466667 ~ 67466879 (+) |
| G833842 | NA | non-coding | downstream | 37132 | 67476821 ~ 67477085 (+) |
| G833843 | NA | non-coding | downstream | 39192 | 67478881 ~ 67479149 (+) |
| G833837 | NA | non-coding | downstream | 80701 | 67520390 ~ 67522734 (+) |
| G833541 | NA | other | upstream | 225031 | 67213420 ~ 67213884 (+) |
| G833241 | LOC106572720 | other | upstream | 504428 | 66931688 ~ 66934487 (+) |
| G833139 | LOC100380641 | other | upstream | 617276 | 66814464 ~ 66821639 (+) |
| G833100 | LOC106613929 | other | upstream | 679242 | 66759278 ~ 66759673 (+) |
| LOC110532701 | LOC106572669 | other | upstream | 1638084 | 65754497 ~ 65801814 (+) |
| G833906 | LOC100194703 | other | downstream | 181189 | 67620878 ~ 67621366 (+) |
| G834099 | NA | other | downstream | 609224 | 68048913 ~ 68049222 (+) |
| fance | fance | other | downstream | 777389 | 68213202 ~ 68218960 (+) |
| G834228 | NA | other | downstream | 828348 | 68268037 ~ 68268408 (+) |
| G834235 | NA | other | downstream | 847526 | 68287215 ~ 68288525 (+) |
