G833842


Basic Information

Item Value
gene id G833842
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67476821 ~ 67477085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU948306
ggtttactgacccctgcctaccttgacctgtctattgcctgcccctgttggattattaaaccattgttaattcgacgtgtctgcatctgggtcttaccttcatacctgataccTGGCTTTcccaatcacccaacctcaacccaattgagatggtttgggatgagttggagtgaaggaaaagtagccaacaagtgctcagcatatgtgggaactccttcaagactgttggaaaagcattccaggtgaagctggataAGAGAATGCc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU948306 True 265 lncRNA 0.47 1 67476821 67477085

Neighbor

gene id symbol gene type direction distance location
LOC110532722 LOC106572704 coding upstream 198518 67263564 ~ 67278303 (+)
LOC110532719 ssrd coding upstream 426936 67045197 ~ 67049885 (+)
LOC110532716 LOC106572708 coding upstream 434727 67028029 ~ 67042094 (+)
LOC118966099 NA coding upstream 850996 66615300 ~ 66628653 (+)
LOC110532711 LOC106572715 coding upstream 883236 66582815 ~ 66593585 (+)
LOC110532726 LOC106572718 coding downstream 3267 67480352 ~ 67580588 (+)
LOC110532729 LOC106572697 coding downstream 130588 67607673 ~ 67618114 (+)
tebp tebp coding downstream 145338 67622423 ~ 67625977 (+)
LOC110532731 LOC106572722 coding downstream 241092 67718177 ~ 67755296 (+)
LOC110533034 LOC106572723 coding downstream 291255 67768340 ~ 67772836 (+)
G833836 NA non-coding upstream 9942 67466667 ~ 67466879 (+)
G833676 NA non-coding upstream 37132 67438915 ~ 67439689 (+)
G833606 adcy6 non-coding upstream 140619 67335437 ~ 67336202 (+)
G833600 NA non-coding upstream 148862 67324339 ~ 67327959 (+)
G833588 NA non-coding upstream 169214 67306853 ~ 67307607 (+)
G833843 NA non-coding downstream 1796 67478881 ~ 67479149 (+)
G833837 NA non-coding downstream 43305 67520390 ~ 67522734 (+)
G833868 NA non-coding downstream 62923 67540008 ~ 67599092 (+)
G833880 NA non-coding downstream 78296 67555381 ~ 67555829 (+)
G833541 NA other upstream 262937 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 542334 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 655182 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 717148 66759278 ~ 66759673 (+)
LOC110532701 LOC106572669 other upstream 1675990 65754497 ~ 65801814 (+)
G833906 LOC100194703 other downstream 143793 67620878 ~ 67621366 (+)
G834099 NA other downstream 571828 68048913 ~ 68049222 (+)
fance fance other downstream 739993 68213202 ~ 68218960 (+)
G834228 NA other downstream 790952 68268037 ~ 68268408 (+)
G834235 NA other downstream 810130 68287215 ~ 68288525 (+)

Expression


Co-expression Network