Gene
RNA
| Item | Value |
|---|---|
| gene id | G833880 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 67555381 ~ 67555829 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106607296 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU948346 | True | 234 | lncRNA | 0.54 | 2 | 67555381 | 67555829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532726 | LOC106572718 | coding | upstream | 37384 | 67480352 ~ 67580588 (+) |
| LOC110532722 | LOC106572704 | coding | upstream | 277078 | 67263564 ~ 67278303 (+) |
| LOC110532719 | ssrd | coding | upstream | 505496 | 67045197 ~ 67049885 (+) |
| LOC110532716 | LOC106572708 | coding | upstream | 513287 | 67028029 ~ 67042094 (+) |
| LOC118966099 | NA | coding | upstream | 929556 | 66615300 ~ 66628653 (+) |
| LOC110532729 | LOC106572697 | coding | downstream | 51844 | 67607673 ~ 67618114 (+) |
| tebp | tebp | coding | downstream | 66594 | 67622423 ~ 67625977 (+) |
| LOC110532731 | LOC106572722 | coding | downstream | 162348 | 67718177 ~ 67755296 (+) |
| LOC110533034 | LOC106572723 | coding | downstream | 212511 | 67768340 ~ 67772836 (+) |
| LOC110533035 | LOC106572734 | coding | downstream | 349202 | 67905031 ~ 67911226 (+) |
| G833837 | NA | non-coding | upstream | 32647 | 67520390 ~ 67522734 (+) |
| G833843 | NA | non-coding | upstream | 76232 | 67478881 ~ 67479149 (+) |
| G833842 | NA | non-coding | upstream | 78296 | 67476821 ~ 67477085 (+) |
| G833836 | NA | non-coding | upstream | 88502 | 67466667 ~ 67466879 (+) |
| G833676 | NA | non-coding | upstream | 115692 | 67438915 ~ 67439689 (+) |
| G833888 | NA | non-coding | downstream | 29455 | 67585284 ~ 67586292 (+) |
| G833905 | NA | non-coding | downstream | 64483 | 67620312 ~ 67620528 (+) |
| G833908 | LOC106572695 | non-coding | downstream | 76543 | 67632372 ~ 67633330 (+) |
| G833910 | NA | non-coding | downstream | 80419 | 67636248 ~ 67636799 (+) |
| G833918 | NA | non-coding | downstream | 111227 | 67667056 ~ 67667801 (+) |
| G833541 | NA | other | upstream | 341497 | 67213420 ~ 67213884 (+) |
| G833241 | LOC106572720 | other | upstream | 620894 | 66931688 ~ 66934487 (+) |
| G833139 | LOC100380641 | other | upstream | 733742 | 66814464 ~ 66821639 (+) |
| G833100 | LOC106613929 | other | upstream | 795708 | 66759278 ~ 66759673 (+) |
| LOC110532701 | LOC106572669 | other | upstream | 1754550 | 65754497 ~ 65801814 (+) |
| G833906 | LOC100194703 | other | downstream | 65049 | 67620878 ~ 67621366 (+) |
| G834099 | NA | other | downstream | 493084 | 68048913 ~ 68049222 (+) |
| fance | fance | other | downstream | 661249 | 68213202 ~ 68218960 (+) |
| G834228 | NA | other | downstream | 712208 | 68268037 ~ 68268408 (+) |
| G834235 | NA | other | downstream | 731386 | 68287215 ~ 68288525 (+) |
