G833905


Basic Information

Item Value
gene id G833905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67620312 ~ 67620528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU948378
gacacaaatatacaatttcacaaagtctgctgcctcagtttgtacgatggcaatttgcatatactccagaatgttatgaagagtgatcagatgaattgcaattaattgcaaagtccctctttgccatgcaaatgaactaaatcccccaaaaacatttgcactgcatttcagccctgccacaaaaggaccagctgacatgtcagtgattctctcgtta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU948378 True 217 lncRNA 0.40 1 67620312 67620528

Neighbor

gene id symbol gene type direction distance location
LOC110532729 LOC106572697 coding upstream 2198 67607673 ~ 67618114 (+)
LOC110532726 LOC106572718 coding upstream 102315 67480352 ~ 67580588 (+)
LOC110532722 LOC106572704 coding upstream 342009 67263564 ~ 67278303 (+)
LOC110532719 ssrd coding upstream 570427 67045197 ~ 67049885 (+)
LOC110532716 LOC106572708 coding upstream 578218 67028029 ~ 67042094 (+)
tebp tebp coding downstream 1895 67622423 ~ 67625977 (+)
LOC110532731 LOC106572722 coding downstream 97649 67718177 ~ 67755296 (+)
LOC110533034 LOC106572723 coding downstream 147812 67768340 ~ 67772836 (+)
LOC110533035 LOC106572734 coding downstream 284503 67905031 ~ 67911226 (+)
LOC118965940 LOC106572726 coding downstream 302129 67922657 ~ 67934517 (+)
G833868 NA non-coding upstream 21220 67540008 ~ 67599092 (+)
G833888 NA non-coding upstream 34020 67585284 ~ 67586292 (+)
G833880 NA non-coding upstream 64483 67555381 ~ 67555829 (+)
G833837 NA non-coding upstream 97578 67520390 ~ 67522734 (+)
G833908 LOC106572695 non-coding downstream 11844 67632372 ~ 67633330 (+)
G833910 NA non-coding downstream 15720 67636248 ~ 67636799 (+)
G833918 NA non-coding downstream 46528 67667056 ~ 67667801 (+)
G833942 NA non-coding downstream 109576 67730104 ~ 67730382 (+)
G833541 NA other upstream 406428 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 685825 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 798673 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 860639 66759278 ~ 66759673 (+)
LOC110532701 LOC106572669 other upstream 1819481 65754497 ~ 65801814 (+)
G833906 LOC100194703 other downstream 350 67620878 ~ 67621366 (+)
G834099 NA other downstream 428385 68048913 ~ 68049222 (+)
fance fance other downstream 596550 68213202 ~ 68218960 (+)
G834228 NA other downstream 647509 68268037 ~ 68268408 (+)
G834235 NA other downstream 666687 68287215 ~ 68288525 (+)

Expression


Co-expression Network