G833918


Basic Information

Item Value
gene id G833918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67667056 ~ 67667801 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU948396
AAATAACtctactttttattattattatgttatttatttcacctttatttaatcaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggcaagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggcaagttgagaacaaggtctcatttacaattgcaacctggccaagataaagcaaagcagttcgacacatacaacgacacagagttacacatggagtaaaacaaacacacagtcaataatacagtataaacaagtctatatacaatgtgagcaaatgaggtgagataagggaggtaaaggcagaaaaaggccatggtggcgaagtaaatacaatatagcaagtaaaacactggagtggtagatttgcagtggaagaatgtgtaaagtagagatagaaataatggggtgcaaagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU948396 True 647 lncRNA 0.37 3 67667056 67667801

Neighbor

gene id symbol gene type direction distance location
tebp tebp coding upstream 41079 67622423 ~ 67625977 (+)
LOC110532729 LOC106572697 coding upstream 48942 67607673 ~ 67618114 (+)
LOC110532726 LOC106572718 coding upstream 149059 67480352 ~ 67580588 (+)
LOC110532722 LOC106572704 coding upstream 388753 67263564 ~ 67278303 (+)
LOC110532719 ssrd coding upstream 617171 67045197 ~ 67049885 (+)
LOC110532731 LOC106572722 coding downstream 50376 67718177 ~ 67755296 (+)
LOC110533034 LOC106572723 coding downstream 100539 67768340 ~ 67772836 (+)
LOC110533035 LOC106572734 coding downstream 237230 67905031 ~ 67911226 (+)
LOC118965940 LOC106572726 coding downstream 254856 67922657 ~ 67934517 (+)
LOC110532736 LOC106572735 coding downstream 431892 68099693 ~ 68111105 (+)
G833910 NA non-coding upstream 30257 67636248 ~ 67636799 (+)
G833908 LOC106572695 non-coding upstream 33726 67632372 ~ 67633330 (+)
G833905 NA non-coding upstream 46528 67620312 ~ 67620528 (+)
G833868 NA non-coding upstream 67964 67540008 ~ 67599092 (+)
G833942 NA non-coding downstream 62303 67730104 ~ 67730382 (+)
G833944 NA non-coding downstream 64048 67731849 ~ 67732048 (+)
G833945 NA non-coding downstream 70189 67737990 ~ 67738209 (+)
G833947 NA non-coding downstream 71753 67739554 ~ 67739775 (+)
G833906 LOC100194703 other upstream 45690 67620878 ~ 67621366 (+)
G833541 NA other upstream 453172 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 732569 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 845417 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 907383 66759278 ~ 66759673 (+)
G834099 NA other downstream 381112 68048913 ~ 68049222 (+)
fance fance other downstream 549277 68213202 ~ 68218960 (+)
G834228 NA other downstream 600236 68268037 ~ 68268408 (+)
G834235 NA other downstream 619414 68287215 ~ 68288525 (+)
LOC110531253 LOC106572751 other downstream 798758 68451084 ~ 68470509 (+)

Expression


Co-expression Network