G834388


Basic Information

Item Value
gene id G834388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67754315 ~ 67755688 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU948952
GCCTGTATCCTCTTCTTCTTTTATAACCGTAAAGAAAGTGTGGTAATGTCCTGAAGTAAATGTATTCAAAAATGACTCACAATGCCACAGTTCAATATTGACACATTTCTGTTTAATAGCGTGTGATAATCTTCTCTTAACATCGTCTTTTCTGAAGGAGACCATTATTACAGTTCAAAAACATTGTTATCAGCTTGAAAACAGACATAAAAAAACACATGAAATCAATACTTCATGTACAAGATGTTGCAAAATGAGGTAGAAATGGTCACAGAAAATGTACAAGAACCAAAAACAAAGTCACTGTAGTAAATACATAACATAAGTAATAGATAACAAAAAAGCTTTTTTGTTGGACAAACTGTTTTCGTATTTTTTTCTTTCCTCATTGGCTTTATAAAGACAAAACACTGATTTACAAACAGGTGTATTGTAGACGTGATGGACTTCTGGGATATGATCCTAACATGCTGCTGCATTGGTGAAACGTTTTCTCCATTTGTAAGAATCTCATTTGAAACTTTGGCATTGTATAGCGTTATCCCAGATCAATTCAGGACAGggctttctctctcagtgtttCGGTTAAATCTGAGACTATTTAGTGACTATCCTATGACTATTTAGTCATATTGGGTGACTATTCTGTGATAATCAGTTTATCACCAAGTCTTTTTCCAAGAAATCAGCCAGACGTTGTGAGCTCATTGCACTTTAAAAGGGCTACCTCACCCAATCATCAATACCTTCTAATGATCTGAGCCGTTCCTGCTAATGAACTCGGACTGATACCATCAAGCATATATGTTTAGCGAGGTAATCCATTAAGTAAAAACAAGTAAACAACTGACAGAAAAATTAACAAAATAAGTATGTTCTTCTAAATCTACATGTTAGACAAACATGGACGTTTTGGGGAATCTGAGCCTGGTGAACTGGCTGAAAGATGTTTAACGAATCACATTGACTAATTATAGTATAGATATAGGCTGCTATTCATGAACTAAACTCTCATTACCTCTGTTTTAAACTACGACAGTTGGCCTCAAGCCTCAGGCCCTGCCAGATATGCAACACCTCTATCTGAAAGCTAATTATAACAGCCTGTAATGATTATTATCAATTATGTATCTTGATGTAGTTGCATGTAAATGATTACATATTTAACCCATCTCTCAGTACCCTCCCAAGGCTGAGTTCTCCTGCTTGGTTTAAAGATGTATTTTTAGTTTATTAGACCTACCATGttgccaatggcaccctattccctatatagtgcattacgtTTGACCAAGGCCCTAGTCAAAAGttgtgtactataaagggaatagggtgccatttgagacaaagTGATCAATATGTGCCTGAACCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU948952 True 1374 lncRNA 0.36 1 67754315 67755688

Neighbor

gene id symbol gene type direction distance location
LOC110532730 LOC106572695 coding downstream 120337 67628737 ~ 67633978 (-)
LOC118966100 NA coding downstream 140997 67611132 ~ 67613318 (-)
LOC110532728 LOC106572698 coding downstream 151305 67587799 ~ 67603010 (-)
LOC110532727 LOC106572699 coding downstream 193743 67543067 ~ 67560577 (-)
LOC110531246 LOC106572701 coding downstream 298654 67327762 ~ 67455661 (-)
LOC110532733 LOC106567001 coding upstream 39369 67795057 ~ 67904020 (-)
LOC110532734 LOC106572725 coding upstream 175132 67930820 ~ 68027791 (-)
LOC118966101 NA coding upstream 212125 67967813 ~ 67971445 (-)
LOC110531249 LOC106572727 coding upstream 273189 68028408 ~ 68079899 (-)
LOC110532737 LOC106572728 coding upstream 368800 68124488 ~ 68138733 (-)
G834387 NA non-coding downstream 416 67753535 ~ 67753899 (-)
G834386 NA non-coding downstream 1149 67752679 ~ 67753166 (-)
G834385 NA non-coding downstream 1998 67750972 ~ 67752317 (-)
G834381 NA non-coding downstream 11660 67742297 ~ 67742655 (-)
G834349 NA non-coding downstream 45385 67667095 ~ 67708930 (-)
G834361 NA non-coding upstream 35401 67791089 ~ 67793357 (-)
G834409 NA non-coding upstream 61051 67816739 ~ 67817613 (-)
G834515 NA non-coding upstream 305564 68061252 ~ 68061577 (-)
G834580 NA non-coding upstream 461357 68217045 ~ 68233316 (-)
G833521 NA other downstream 569072 67179249 ~ 67185243 (-)
G833029 NA other downstream 1165635 66587412 ~ 66588680 (-)
G832991 myl6b other downstream 1242749 66506278 ~ 66515999 (-)
G834676 NA other upstream 619970 68375658 ~ 68376157 (-)
G835608 LOC106572767 other upstream 1224195 68979883 ~ 69058294 (-)
G835808 NA other upstream 1675879 69431567 ~ 69431900 (-)
LOC118966109 NA other upstream 2327118 70082681 ~ 70084697 (-)

Expression


Co-expression Network