Gene
RNA
| Item | Value |
|---|---|
| gene id | G834580 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 68217045 ~ 68233316 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Fanconi anemia group E protein isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU949182 | True | 353 | lncRNA | 0.42 | 2 | 68217045 | 68233316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531250 | LOC106572796 | coding | downstream | 9866 | 68194344 ~ 68207179 (-) |
| LOC110532740 | LOC106572797 | coding | downstream | 23921 | 68182566 ~ 68193124 (-) |
| LOC110532739 | LOC106572792 | coding | downstream | 37997 | 68151271 ~ 68179048 (-) |
| LOC110532738 | LOC106572729 | coding | downstream | 66012 | 68138815 ~ 68151033 (-) |
| LOC110532737 | LOC106572728 | coding | downstream | 78312 | 68124488 ~ 68138733 (-) |
| LOC110531251 | LOC105023852 | coding | upstream | 13631 | 68246539 ~ 68252815 (-) |
| tlr5 | tlr5 | coding | upstream | 78485 | 68311801 ~ 68315049 (-) |
| LOC110532747 | LOC106566980 | coding | upstream | 188365 | 68421681 ~ 68444643 (-) |
| LOC110531254 | LOC106572752 | coding | upstream | 235575 | 68466591 ~ 68546684 (-) |
| cyp2k5 | cyp2k5 | coding | upstream | 356378 | 68589694 ~ 68603072 (-) |
| G834515 | NA | non-coding | downstream | 155468 | 68061252 ~ 68061577 (-) |
| LOC118966101 | NA | non-coding | downstream | 245603 | 67967813 ~ 67971445 (-) |
| G834409 | NA | non-coding | downstream | 399432 | 67816739 ~ 67817613 (-) |
| G834361 | NA | non-coding | downstream | 423688 | 67791089 ~ 67793357 (-) |
| G834388 | NA | non-coding | downstream | 461357 | 67754315 ~ 67755688 (-) |
| G834600 | NA | non-coding | upstream | 22440 | 68255756 ~ 68256003 (-) |
| G834603 | NA | non-coding | upstream | 24509 | 68257825 ~ 68258113 (-) |
| G834610 | NA | non-coding | upstream | 33580 | 68266896 ~ 68267119 (-) |
| G834611 | NA | non-coding | upstream | 34798 | 68268114 ~ 68268337 (-) |
| LOC110531249 | LOC106572727 | other | downstream | 178084 | 68028408 ~ 68079899 (-) |
| LOC110532727 | LOC106572699 | other | downstream | 656468 | 67543067 ~ 67560577 (-) |
| LOC110531246 | LOC106572701 | other | downstream | 761645 | 67327762 ~ 67455661 (-) |
| G833521 | NA | other | downstream | 1031802 | 67179249 ~ 67185243 (-) |
| G833029 | NA | other | downstream | 1628365 | 66587412 ~ 66588680 (-) |
| G834676 | NA | other | upstream | 142342 | 68375658 ~ 68376157 (-) |
| G835608 | LOC106572767 | other | upstream | 746567 | 68979883 ~ 69058294 (-) |
| G835808 | NA | other | upstream | 1198251 | 69431567 ~ 69431900 (-) |
| LOC118966109 | NA | other | upstream | 1849490 | 70082681 ~ 70084697 (-) |
| G836619 | NA | other | upstream | 1975362 | 70208678 ~ 70209625 (-) |
