G835742


Basic Information

Item Value
gene id G835742
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 69280733 ~ 69282396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU950604
gaagacagTAGAGGGGAAGAAGACAGTGGAGGGGAAGAAGACAGTGGAGAACCACTTTCTGTTCCCAGTGTAATGCAGTGGCTGACAGGGCAGCCACACACACCTGCTTGTCTCAGATAGAGAAAAGTTAAAGATGGTGGTCATTTTTGACCACTCATGTCTAGAACGCATGCCTAACCACACTGTTTGTTACCCTGTTGTTAGTGCATACGCCAAAACGATAACATTTCCCACAGCCCATCTGAGAGATTACGATGCATTTAATTCAAACATTGAAACAGCAATCAAATACAGTGCAAGGTTTGATAGAGTTTAGCTGAAAGACTACTCAATTTAACTGACTGATAAACCACATACAGCACATTATGTTCCTGTGTAAAGAAGCAGTCCAAATCTTTCTTGCTTTATTTTGGGGTTAATGCTTAAATGTACGCCCTTGACAACTGTGATTTAGAAAATGTTTTTTATTAACCTCTTACTACTCAGAGCATTCATAGAAGGATGGTAGACTGCAGCGATAGCTCAGAGGTCTAAACGCTGGATGGAGGGACTGATGTAGTATTTTGGCTTTTGTAAAGTTTTTTGCATTATGTTTTAATACACTGGTCTTAGACTATACCTTCAAACACCAAAACCTTAGGTGGCTCCATTGCTAGTAAAGAGTGTTACACTGTATcaacaaaatgtgtttttgcatCATCGTAGTCCACGGGAATTATGTAAATGAAATGACATACAATTTACTCATTTTCTGGTCCTTGCCAACCTACAGTGTTCCAGATGTACTGTAACTACTTTAGGGTTTCATCGGTTCTCTCCCCTTTAATATGTGATTCCTTCTGTTTTTATTcttgattttgtttaacaagagCCTGAAGCTGTTCTATAAACAGTAGACCGATGGGGGCCAATGACTCCATTTTAGTATAGTGTACACCAAGTGGTATAGAATACAAGTATATCAACTTTATCCAAATGCAATGTAATAGACCAATTTATCTCCGGGCTTAAAGCTAGCATTATTCACAAGCAAAGGTGCTTGGTCTGACTTTGTTATTCATTTGTAGTACTGTATCCTGTAACCAAACGAGTCACTGCTTATTCAGTGGTCTCCAACCTCACCTCTGGAGCTCAGAAATGATGAAgataacactgagagacagtgccACTCTATTAGACAGGAATTTGGTGCTGAAGTACAATAATACTTCACAAGTCCTTTTGATTACCCAAGGTTCATTTGTATGCAGCGAGAGATGGAAGGTTTTATTAAAATGTCAATTAAAGGGTTTTTTCAGTTGCTCATTTTTATATTTTGACATGACAAAGTTCTGTATTTGTGGATCTACTGTATTGGTGTTTACATAATGTACTTACCACCGTTCGCTGAACTCCATGTCACTGCCTGCTTTTGATTTTCATGTGAAGACACTGGATGTCATGTACACTAACTGTAAAGGTGACAGCTCCATAAATGCTACGGGGAGGGAAAGTCACCTCGGGAGCCACATGACAGCTTTGGATTCTTGGACTCCTCTGTTTTATAGGTCACTGCATTATTAGAACCTTGGAAACTGTTTGCTGTATGTCCAATGGTCGTGCTGTGAACATGTTACAATTATTCACATGTGATTGTTTTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU950604 True 1642 lncRNA 0.39 2 69280733 69282396

Neighbor

gene id symbol gene type direction distance location
LOC118966107 NA coding downstream 173341 69106198 ~ 69107392 (-)
LOC118966106 NA coding downstream 224568 69054523 ~ 69056165 (-)
LOC110532760 LOC106572768 coding downstream 230902 69024339 ~ 69049831 (-)
LOC110532759 NA coding downstream 237199 69038907 ~ 69043534 (-)
LOC110532757 LOC106572754 coding downstream 268525 69005427 ~ 69012208 (-)
LOC110532775 LOC106572811 coding upstream 71599 69353995 ~ 69356367 (-)
LOC110532794 LOC106572833 coding upstream 791148 70073544 ~ 70093532 (-)
LOC118966109 NA coding upstream 800285 70082681 ~ 70084697 (-)
LOC118965942 LOC106572832 coding upstream 815307 70097703 ~ 70101827 (-)
LOC110531267 LOC106572832 coding upstream 819239 70101635 ~ 70186834 (-)
G835740 NA non-coding downstream 978 69279465 ~ 69279755 (-)
G835739 NA non-coding downstream 1808 69278688 ~ 69278925 (-)
G835610 NA non-coding downstream 11295 69199077 ~ 69269438 (-)
G835609 NA non-coding downstream 12431 69197777 ~ 69268302 (-)
G835659 NA non-coding downstream 66511 69210088 ~ 69214222 (-)
G835720 NA non-coding upstream 1373 69283769 ~ 69285933 (-)
G835733 NA non-coding upstream 3945 69286341 ~ 69286836 (-)
G835744 LOC106572807 non-coding upstream 9051 69291447 ~ 69303132 (-)
G835731 NA non-coding upstream 9786 69292182 ~ 69293271 (-)
G835721 NA non-coding upstream 11243 69293639 ~ 69335057 (-)
G835608 LOC106572767 other downstream 222439 68979883 ~ 69058294 (-)
G834676 NA other downstream 904576 68375658 ~ 68376157 (-)
LOC110531249 LOC106572727 other downstream 1241772 68028408 ~ 68079899 (-)
LOC110532727 LOC106572699 other downstream 1720156 67543067 ~ 67560577 (-)
LOC110531246 LOC106572701 other downstream 1825333 67327762 ~ 67455661 (-)
G835808 NA other upstream 149171 69431567 ~ 69431900 (-)
G836619 NA other upstream 926282 70208678 ~ 70209625 (-)
LOC110531265 plagl2 other upstream 1146070 70427951 ~ 70479312 (-)
G837952 NA other upstream 2539201 71821597 ~ 71822337 (-)

Expression


Co-expression Network