G835744 (LOC106572807)


Basic Information

Item Value
gene id G835744
gene name LOC106572807
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 69291447 ~ 69303132 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU950607
TTCAGTTTTACATGATGAAAACTGTTTGCATATTGCAGTATTTGAAGGAAATAACCATTGTACATGAGCCACActtactgtgtgtgtggctggcagGATGTAAATGATCCATCTGAATAGGTGTCACCAGTAGTCAGAACACACAGTATCTGTAGATGTTGTTCCTGCACCAACACAGGGTGAAACTCATTAAGGATCATAACTTAAGATGTGCTTAACTCACGACTGCATAAATCATGTACTAATGTCAATGGAAGATCCATGAAGACATACCTGTGTGGTTGATGTATTAACCAGGTTTACAGCTGCTGTGTCTCTGGGCTGCTCTACAACCCTCCTTAGTTGGGTCTAGACAGTAGAACCCCTCCAGTGTCCCACAGACAGTGTCTGATGAAGGTCTACATGGCTGCCTTACCTTCAAACCAAGGCCAGGGTCACAGTTTGTACACAGTATGCATGCTGTAAGACCACTGGGTTCATCAAGGAACGTGGAGTCGGTACAGGGGACACAGGAAGTACTTGTAAATTCTGTACAGTGTTTATGTACCCGGTTTCCTGTGGGATAAAGGTCAGTGTCATGGATTGATTGGTATTGGAATGTATTTTCTTCATCATAATCCATATAGTATACAGAGCTGGTCCTTACCTGGTGAACACATAGGACAGCATTCAATACCTGTTCTGTACTCTGCTCTACCACATGCAATAGAGAGCTGAATGTTTAGAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU950607 True 728 lncRNA 0.43 2 69291447 69303132

Neighbor

gene id symbol gene type direction distance location
LOC118966107 NA coding downstream 184055 69106198 ~ 69107392 (-)
LOC118966106 NA coding downstream 235282 69054523 ~ 69056165 (-)
LOC110532760 LOC106572768 coding downstream 241616 69024339 ~ 69049831 (-)
LOC110532759 NA coding downstream 247913 69038907 ~ 69043534 (-)
LOC110532757 LOC106572754 coding downstream 279239 69005427 ~ 69012208 (-)
LOC110532775 LOC106572811 coding upstream 50863 69353995 ~ 69356367 (-)
LOC110532794 LOC106572833 coding upstream 770412 70073544 ~ 70093532 (-)
LOC118966109 NA coding upstream 779549 70082681 ~ 70084697 (-)
LOC118965942 LOC106572832 coding upstream 794571 70097703 ~ 70101827 (-)
LOC110531267 LOC106572832 coding upstream 798503 70101635 ~ 70186834 (-)
G835733 NA non-coding downstream 4611 69286341 ~ 69286836 (-)
G835720 NA non-coding downstream 5514 69283769 ~ 69285933 (-)
G835742 NA non-coding downstream 9051 69280733 ~ 69282396 (-)
G835740 NA non-coding downstream 11692 69279465 ~ 69279755 (-)
G835739 NA non-coding downstream 12522 69278688 ~ 69278925 (-)
G835728 NA non-coding upstream 23971 69327103 ~ 69330514 (-)
G835791 NA non-coding upstream 67451 69370583 ~ 69372548 (-)
G835734 NA non-coding upstream 95223 69398355 ~ 69417343 (-)
G835724 NA non-coding upstream 96075 69399207 ~ 69401206 (-)
G835807 NA non-coding upstream 116835 69419967 ~ 69420183 (-)
G835608 LOC106572767 other downstream 233153 68979883 ~ 69058294 (-)
G834676 NA other downstream 915290 68375658 ~ 68376157 (-)
LOC110531249 LOC106572727 other downstream 1252486 68028408 ~ 68079899 (-)
LOC110532727 LOC106572699 other downstream 1730870 67543067 ~ 67560577 (-)
LOC110531246 LOC106572701 other downstream 1836047 67327762 ~ 67455661 (-)
G835808 NA other upstream 128435 69431567 ~ 69431900 (-)
G836619 NA other upstream 905546 70208678 ~ 70209625 (-)
LOC110531265 plagl2 other upstream 1125334 70427951 ~ 70479312 (-)
G837952 NA other upstream 2518465 71821597 ~ 71822337 (-)

Expression


Co-expression Network