G835731


Basic Information

Item Value
gene id G835731
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 69292182 ~ 69293271 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU950593
TTTAAAAGTGCAACCTTTGAGGTAATAGACATTCCTGTCAGCCATCTCCTTACCACATTGAGTATGATAGAAAATACTGCTGTATTAAGTAGGTATTGGGGGACTATTCATTCACATACCTCTGTAGAGCTTTGTGTCTCTGGAAAAGTCCTCTCTGGAAAAGTACAAGAATCAACATTGAGACAAAAACTAATTTGGAACTCGATAACATACTGTTTGACAGGGGTGTTGTCATGATATTCAGAACATTATTGTGCATTTCATTTTATTAATCTTGtactggtacgtcctgtatgtagctccattcttgtgtgatctagtactggtacttcctgtatgtagcacCATTCTTGAGTGAtctagtactggtacttcctgtatgtagcatCATTCTTGAGTGAtctagtactggtacttcctgtatgtagctccattcttgtgtgatctagtactggtacttcctgtatgtagcacCATTCTTGTGTGAtctagtactggtacttcctgtatgtagcttattttttaactgcaTCATttggaagggctcgtaagcaagcggtaaagtctacacctgttgtattcggcaaataaaatgtgatttgattcagTGTTGGATGTTTCTAACTTGTTCATCTGGGCAATTAAAACAAATGAAACGGTACAATGCCCCAAAATAATCTCACCAGATACAGGACCTTTCATTTTTCTTCTAATAGCTACTGCTGCCATCACAGCtagtaccaccaccaccaccacagcagcagcaCCAGATATTATTTCAACAATGGAAAGGGAGGTCTGTGGTCCACACTCAGAGTCAGACCAATGAGTTCCAGATTTAATTTGCTGAAGCTTCAAGGTATCACATCTATAATAGGAGAAATAGACCACTGGTAAATTGACAATGCGGTCATCC

Function

NR:

description
tumor necrosis factor receptor superfamily member 5-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU950593 True 916 lncRNA 0.39 2 69292182 69293271

Neighbor

gene id symbol gene type direction distance location
LOC118966107 NA coding downstream 184790 69106198 ~ 69107392 (-)
LOC118966106 NA coding downstream 236017 69054523 ~ 69056165 (-)
LOC110532760 LOC106572768 coding downstream 242351 69024339 ~ 69049831 (-)
LOC110532759 NA coding downstream 248648 69038907 ~ 69043534 (-)
LOC110532757 LOC106572754 coding downstream 279974 69005427 ~ 69012208 (-)
LOC110532775 LOC106572811 coding upstream 60724 69353995 ~ 69356367 (-)
LOC110532794 LOC106572833 coding upstream 780273 70073544 ~ 70093532 (-)
LOC118966109 NA coding upstream 789410 70082681 ~ 70084697 (-)
LOC118965942 LOC106572832 coding upstream 804432 70097703 ~ 70101827 (-)
LOC110531267 LOC106572832 coding upstream 808364 70101635 ~ 70186834 (-)
G835733 NA non-coding downstream 5346 69286341 ~ 69286836 (-)
G835720 NA non-coding downstream 6249 69283769 ~ 69285933 (-)
G835742 NA non-coding downstream 9786 69280733 ~ 69282396 (-)
G835740 NA non-coding downstream 12427 69279465 ~ 69279755 (-)
G835739 NA non-coding downstream 13257 69278688 ~ 69278925 (-)
G835721 NA non-coding upstream 368 69293639 ~ 69335057 (-)
G835728 NA non-coding upstream 33832 69327103 ~ 69330514 (-)
G835791 NA non-coding upstream 77312 69370583 ~ 69372548 (-)
G835734 NA non-coding upstream 105084 69398355 ~ 69417343 (-)
G835724 NA non-coding upstream 105936 69399207 ~ 69401206 (-)
G835608 LOC106572767 other downstream 233888 68979883 ~ 69058294 (-)
G834676 NA other downstream 916025 68375658 ~ 68376157 (-)
LOC110531249 LOC106572727 other downstream 1253221 68028408 ~ 68079899 (-)
LOC110532727 LOC106572699 other downstream 1731605 67543067 ~ 67560577 (-)
LOC110531246 LOC106572701 other downstream 1836782 67327762 ~ 67455661 (-)
G835808 NA other upstream 138296 69431567 ~ 69431900 (-)
G836619 NA other upstream 915407 70208678 ~ 70209625 (-)
LOC110531265 plagl2 other upstream 1135195 70427951 ~ 70479312 (-)
G837952 NA other upstream 2528326 71821597 ~ 71822337 (-)

Expression


Co-expression Network