XLOC_027323 (BX537308.1)


Basic Information

Item Value
gene id XLOC_027323
gene name BX537308.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 21966094 ~ 21967444 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053768
CAACGAGCAGGCGACAACAGCAGGGAGCAGGGGACTCTACAGCTACCTGCATCCTCTGGCCGCTCGTTAAGCCTGCGACTCCTGCTCAACTACCAGCTGCCAATAAAATGCTACCACATCAACTGCTTTGCTGTTTACTCATGCTACTGCCAACCATGTCCTCCGTTCCTTCACCCCCTTCTCACTTGCAGCTGCATTGTACTACGGCTGGACAGCTTCACCACACTGCCCATTTCCATACACTACTACACATTCAAACACTTCAGAACTGTCACAACCTACATGCTTAAACCGAGCACTCTAACCAAACAACACACACTACTCTAGCACACTGCTTAACTGTTAGGACATTCTCTGACACGCATTCCACCTGTCTTTACACACAACAACATGCTCAATTACACTCACAAAAGTATCATCAACTCACTCCAACACAAACACGCAACAGTACCACTGCTTCCTGCTCTGGACTACCTCAGCCTCCACATCTACACAACTCTGCAGCATTAAGTATCACACACACCATCAACTCTCAAACTATCTACATGTCACAACATGTTACAAACTATAATGACATACAACCAAAGTAACAAATCGACAGCCTCATCCAAGCAACCACAGTACACCTGCACAACAATCAAGCAGCACACTATACAAGCATCAACACAACCAAACAGCACAACAGACAAACCAAACAGACCGCACATGCATAACAAATGCATGATAACAGACAACCGGACCCACAAACAATACGGCTGCAACCAACATTTCAGTTTACAATCAATTCATCTGCTCATTACTTCCTCCATTCATTGgccaatcaaataaaaaacacaaagaaatagattcctttttttttctcttactcTTCAGTCAAGATAGCTTATCACTCCATTATTACACTCATAATTACTATCACAACAACATCAACAGACTGCCCACTTTTAGCCTATTTACCATAGACATATCTACAAACAAGCTTACATTCCCATTCATACCACACATCAACTAGCATCAAATATTACCTTTTCTTTTCTCAAAACAAAACACCTCCAACTTAGCTCACTGCTTGTTTCAACTGAACAACATGATTTGACCTTGGCCTCACAAAAACTCAATCACATTACATCAAATCTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096999

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053768 True 1137 lncRNA 0.42 2 21966094 21967444

Neighbor

gene id symbol gene type direction distance location
XLOC_027322 acss3 coding upstream 7799 21866851 ~ 21958295 (+)
XLOC_027321 BX537308.2 coding upstream 124125 21841853 ~ 21841969 (+)
XLOC_027319 myf5 coding upstream 220987 21741228 ~ 21745107 (+)
XLOC_027320 BX537156.1 coding upstream 222110 21743863 ~ 21743984 (+)
XLOC_027318 myf6 coding upstream 245151 21717793 ~ 21720943 (+)
XLOC_027324 NA coding downstream 55181 22022625 ~ 22113703 (+)
XLOC_027325 llph coding downstream 330395 22297839 ~ 22300326 (+)
XLOC_027326 NA coding downstream 371075 22338519 ~ 22342835 (+)
XLOC_027327 guca1a coding downstream 375649 22343093 ~ 22350976 (+)
XLOC_027328 lhfpl3 coding downstream 397617 22365061 ~ 22419743 (+)
XLOC_027317 BX569790.1 non-coding upstream 269810 21653609 ~ 21696284 (+)
XLOC_027316 NA non-coding upstream 642114 21322987 ~ 21323980 (+)
XLOC_027314 NA non-coding upstream 933338 21028784 ~ 21032756 (+)
XLOC_027329 NA non-coding downstream 457006 22424450 ~ 22426637 (+)
XLOC_027331 BX537168.1 non-coding downstream 580132 22547576 ~ 22563565 (+)
XLOC_027337 NA non-coding downstream 1333445 23300889 ~ 23301228 (+)

Expression


Co-expression Network