Gene
RNA
| Item | Value |
|---|---|
| gene id | G838996 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 72142934 ~ 72144634 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: guanine nucleotide-binding protein G(i) subunit alpha-1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU954579 | True | 340 | lncRNA | 0.46 | 2 | 72142934 | 72144634 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531272 | LOC106572865 | coding | downstream | 107121 | 71985134 ~ 72035813 (-) |
| LOC110531271 | nfya | coding | downstream | 162549 | 71960538 ~ 71980385 (-) |
| LOC110532803 | LOC106572868 | coding | downstream | 187388 | 71906991 ~ 71955546 (-) |
| LOC110532805 | LOC106566386 | coding | downstream | 237160 | 71901581 ~ 71905774 (-) |
| LOC110532802 | kcnc4 | coding | downstream | 243186 | 71834204 ~ 71899748 (-) |
| LOC110532812 | LOC106572857 | coding | upstream | 61812 | 72206446 ~ 72222104 (-) |
| LOC118966115 | NA | coding | upstream | 91494 | 72236128 ~ 72238619 (-) |
| eps8l3b | LOC106572888 | coding | upstream | 164147 | 72308781 ~ 72328432 (-) |
| LOC110532814 | LOC106566373 | coding | upstream | 184274 | 72328908 ~ 72333131 (-) |
| LOC118966116 | NA | coding | upstream | 237961 | 72382595 ~ 72384764 (-) |
| G838995 | NA | non-coding | downstream | 2764 | 72139513 ~ 72140170 (-) |
| G838218 | NA | non-coding | downstream | 15644 | 72127087 ~ 72127290 (-) |
| G838217 | NA | non-coding | downstream | 16365 | 72126256 ~ 72126569 (-) |
| G838208 | NA | non-coding | downstream | 20016 | 72122250 ~ 72122918 (-) |
| G838189 | NA | non-coding | downstream | 35502 | 72107120 ~ 72107432 (-) |
| G839017 | NA | non-coding | upstream | 39243 | 72183877 ~ 72184280 (-) |
| G839034 | NA | non-coding | upstream | 72950 | 72217584 ~ 72263359 (-) |
| G839074 | NA | non-coding | upstream | 155177 | 72299811 ~ 72300212 (-) |
| G839075 | NA | non-coding | upstream | 156206 | 72300840 ~ 72303403 (-) |
| G839089 | NA | non-coding | upstream | 193978 | 72338612 ~ 72356459 (-) |
| G838204 | NA | other | downstream | 23647 | 72118661 ~ 72119287 (-) |
| G838098 | NA | other | downstream | 206361 | 71934878 ~ 71936573 (-) |
| G837952 | NA | other | downstream | 320597 | 71821597 ~ 71822337 (-) |
| LOC110531265 | plagl2 | other | downstream | 1713976 | 70427951 ~ 70479312 (-) |
| G836619 | NA | other | downstream | 1933309 | 70208678 ~ 70209625 (-) |
| G839372 | NA | other | upstream | 882341 | 73026975 ~ 73028966 (-) |
| G839553 | NA | other | upstream | 1316721 | 73461355 ~ 73463040 (-) |
| rs21 | LOC106572905 | other | upstream | 1580618 | 73725252 ~ 73732414 (-) |
| G840404 | NA | other | upstream | 2557683 | 74702317 ~ 74703252 (-) |
| G840763 | NA | other | upstream | 2936937 | 75081571 ~ 75086417 (-) |
