XLOC_027345



Basic Information


Item Value
gene id XLOC_027345
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 25084095 ~ 25089847 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00057735
GTTAAAATTTGACGCAGGACTTTTCAAAATTTTGGatcataattatttataactgatTTTTGCAGCACTTATTTCAGAGTCATTTACCAGTCAGAACTTTCGCACCCAAACAAAcgacaagacaacaaaacactAAGATGTGAAAAAGCAACTTTTAATTAAATCCATAGTAAAATGAAACTGCACCTCCAGTCAAAATCAATCGGAAAAACCATATTAAAAGGCAGATTATAgtacagaatgtttttttttcctttctcggCTGACATCTCAGCATTGATGAATCAGCACACACAACGAACAACCTTTAATGAGAGCGAACTGAGAGGTTCATTTCAACACACGTTTACCGAACAATCATGAGCTCAGTACAAAGATCATATAGACATAATTTACGATTCTCCACATAAAAAAGTAACATATagacatttgacatttttaaaaaatacattatgattcTGAGTTAAGTTAACCGAGTTAAAAGAAGGGTTGGGTCAGAACAAAAAACAGCaacgaaacaaacaaatgcagcAAACAAGAGTCTGGAAACCAATTAAGGTGAAAACAGATGAACACGGAGAAGAATAAATGTGGGTCAGTGCGCTTTGCGTTTCCTTTTTTTTGTCTTCTTGTCTTTCTTCTTGCCAGCACATTTTATTCTCGGTGACGACGCTGCAGCCACGAGCCTTAGCCTGGTTGGGTGGAGTCTGG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00057735 True 711 lncRNA 0.36 2 25084095 25089847

Neighbor


gene id symbol gene type direction distance location
XLOC_027344 NA coding upstream 67827 25014049 ~ 25016268 (+)
XLOC_027343 NA coding upstream 325314 24758348 ~ 24758781 (+)
XLOC_027342 NA coding upstream 1195301 23880394 ~ 23888794 (+)
XLOC_027341 NA coding upstream 1232447 23844584 ~ 23851648 (+)
XLOC_027340 NA coding upstream 1348124 23549874 ~ 23735971 (+)
XLOC_027346 kin coding downstream 91725 25181572 ~ 25188160 (+)
XLOC_027347 itih5 coding downstream 130827 25220674 ~ 25245817 (+)
XLOC_027348 sfmbt2 coding downstream 211063 25300910 ~ 25359034 (+)
XLOC_027349 prkcq coding downstream 320446 25410293 ~ 25441127 (+)
XLOC_027350 il15ra coding downstream 469002 25558849 ~ 25576713 (+)
XLOC_027357 NA non-coding downstream 664190 25754037 ~ 25755349 (+)
XLOC_027365 BX088697.1 non-coding downstream 1480851 26570698 ~ 26570813 (+)
XLOC_027366 NA non-coding downstream 1741408 26831255 ~ 26836675 (+)
XLOC_027372 CT583696.1 non-coding downstream 3025760 28115607 ~ 28115721 (+)
XLOC_027375 CU694442.1 non-coding downstream 3294590 28384437 ~ 28407131 (+)

Expression



Co-expression Network