G839372


Basic Information

Item Value
gene id G839372
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 73026975 ~ 73028966 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU955034
TCCCATGTAGCTAGGCCTGTTAGATAGAATCTGGTCCCAGTACTGGGCCCCTGTCCTCCCATGTAGCTAGGCCTGTTAGATAGAATCTGATCCCAGTACTGGGCCCCTGTCCTCCCATGTAGCTAGGCCTGTTAGATAGAATCTGGTCCCAGTACTGGGCCCCTGTCCTCCCATGTAGCTAGGCCTGTTAGATAGAATCTGGTCCCAGTACTGGGCCCCTGTCCTCCCATGTAGCTAGGCCTGTTAGTCACAGTGAATATGGCAGCACAGCACACATTATATCAGGATCCCCTCATGGAGGAGATGCACTAGCCTGGTACCCTAGGAGTTGTCAAGACTGCACAAATATACCAGGCTAGAGAAGTCTTGCTGTAGCAGCCACACTTGGGACAAATAGAGGAGTGAGGAAACCAGGGttaacatcaccaccaccaccaccaccaccacccgcTGGTCCCTCTAGCACCCTTGTACAAGTCCGGTCACCCACAGTCAGATCAGAACACACGTCGGGGTCTCAGTGTAGCTTGAAGACACGAAGACAATTTAAAACATTGTATAAGAAAAATGTAAAACAGGTTTAAAAATCTGCCTATAAACTTCAAACGTTTCTTAATTATGTTGACTCACTACCGATGTCGAGGAGAGTGTCAAAACCAATTAAAAGCACTGAGAGATTCTATCCAGTCCTCCACAAAGAGTAGAAACCTAACATCCATGGAGTAGTAACTGAGGGATTCTATCTAGTCTTCCTTGGAGTGCAATAGATGATGTCTGCATCAAGGTATTGTACActacaggacagggcagggggaTATGCTGATCCATAGATGACTCAGTGACTCTgagatatagtcagtcctctTCAAGGGTCTCAAATCATTAACTCGACCCAGTAAGTTCAGGCATTCTGTCTGACAATATGGTGCTTGTCAAGAGGTGTATAATGAAAGGAGGTGGATGGGACAGTCTTGTGTACGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCGCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGTTGTACCCTTTGACTGTTCTAGTAAtgctatacccccccccccccccccccccctgttaaaCAAGGCATAATGCTTCAGAACACAATAACATATTGGAGGTTTATAAATGACTTGGTTCAGA
>TU955035
TCCCATGTAGCTAGGCCTGTTAGATAGAATCTGGTCCCAGTACTGGGCCCCTGTCCTCCCATGTAGCTAGGCCTGTTAGATAGAATCTGATCCCAGTACTGGGCCCCTGTCCTCCCATGTAGCTAGGCCTGTTAGATAGAATCTGGTCCCAGTACTGGGCCCCTGTCCTCCCATGTAGCTAGGCCTGTTAGATAGAATCTGGTCCCAGTACTGGGCCCCTGTCCTCCCATGTAGCTAGGCCTGTTAGTCACAGTGAATATGGCAGCACAGCACACATTATATCAGGATCCCCTCATGGAGGAGATGCACTAGCCTGGTACCCTAGGAGTTGTCAAGACTGCACAAATATACCAGGCTAGAGAAGTCTTGCTGTAGCAGCCACACTTGGGACAAATAGAGGAGTGAGGAAACCAGGGttaacatcaccaccaccaccaccaccaccacccgcTGGTCCCTCTAGCACCCTTGTACAAGTCCGGTCACCCACAGTCAGATCAGAACACACGTCGGGGTCTCAGTGTAGCTTGAAGACACGAAGACAATTTAAAACATTGTATAAGAAAAATGTAAAACAGGTTTAAAAATCTGCCTATAAACTTCAAACGTTTCTTAATTATGTTGACTCACTACCGATGTCGAGGAGAGTGTCAAAACCAATTAAAAGCACTGAGAGATTCTATCCAGTCCTCCACAAAGAGTAGAAACCTAACATCCATGGAGTAGTAACTGAGGGATTCTATCTAGTCTTCCTTGGAGTGCAATAGATGATGTCTGCATCAAGGTATTGTACActacaggacagggcagggggaTATGCTGATCCATAGATGACTCAGTGACTCTgagatatagtcagtcctctTCAAGGGTCTCAAATCATTAACTCGACCCAGTAAGTTCAGGCATTCTGTCTGACAATATGGTGCTTGTCAAGAGGTGTATAATGAAAGGAGGTGGATGGGACAGTCTTGTGTACGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCGCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGCTGTGAGAGTCTGGGGCTATAACAGCTCTCTGAGGTACCCCACACCACAGGACTGGGACCATCGTTGTACCCTTTGACTGTTCTAGTAAtgctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU955034 False 1928 TUCP 0.52 2 73026975 73028966
TU955035 True 1837 TUCP 0.52 2 73027066 73028966

Neighbor

gene id symbol gene type direction distance location
LOC110516830 slc2a5 coding downstream 443706 72567909 ~ 72583269 (-)
LOC110532820 LOC106572893 coding downstream 576050 72437484 ~ 72450925 (-)
LOC110518319 NA coding downstream 588837 72432809 ~ 72438138 (-)
LOC110532819 s2533 coding downstream 599992 72405823 ~ 72426983 (-)
LOC110532818 LOC106572873 coding downstream 631191 72385568 ~ 72395784 (-)
ubr4 ubr4 coding upstream 41728 73070694 ~ 73232041 (-)
LOC110531279 LOC106572884 coding upstream 203545 73232511 ~ 73254667 (-)
LOC118966119 NA coding upstream 211375 73240341 ~ 73240892 (-)
LOC118966118 LOC106572900 coding upstream 305752 73334718 ~ 73343470 (-)
tpd52l2b LOC106572880 coding upstream 324161 73353127 ~ 73378131 (-)
G839389 NA non-coding downstream 24509 73001037 ~ 73002466 (-)
G839378 NA non-coding downstream 30518 72992751 ~ 72996457 (-)
G839359 NA non-coding downstream 71500 72955030 ~ 72955475 (-)
G839358 NA non-coding downstream 72147 72954199 ~ 72954828 (-)
G839321 NA non-coding downstream 118238 72908249 ~ 72908737 (-)
G839403 NA non-coding upstream 24047 73053013 ~ 73095339 (-)
G839431 NA non-coding upstream 86704 73115670 ~ 73116922 (-)
G839432 NA non-coding upstream 89676 73118642 ~ 73119021 (-)
G839422 NA non-coding upstream 94523 73123489 ~ 73124559 (-)
G839434 NA non-coding upstream 101240 73130206 ~ 73131045 (-)
G838204 NA other downstream 907688 72118661 ~ 72119287 (-)
G838098 NA other downstream 1090402 71934878 ~ 71936573 (-)
G837952 NA other downstream 1204638 71821597 ~ 71822337 (-)
LOC110531265 plagl2 other downstream 2598017 70427951 ~ 70479312 (-)
G836619 NA other downstream 2817350 70208678 ~ 70209625 (-)
G839553 NA other upstream 432389 73461355 ~ 73463040 (-)
rs21 LOC106572905 other upstream 696286 73725252 ~ 73732414 (-)
G840404 NA other upstream 1673351 74702317 ~ 74703252 (-)
G840763 NA other upstream 2052605 75081571 ~ 75086417 (-)
G840780 tmem81 other upstream 2078453 75107419 ~ 75108925 (-)

Expression


Co-expression Network