Gene
RNA
| Item | Value |
|---|---|
| gene id | G842312 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 76720454 ~ 76720690 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU958820 | True | 237 | lncRNA | 0.44 | 1 | 76720454 | 76720690 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:113363 | LOC106572953 | coding | downstream | 51319 | 76656942 ~ 76669135 (-) |
| mecp2 | LOC106572920 | coding | downstream | 402870 | 76309986 ~ 76317584 (-) |
| hcfc1b | LOC106572922 | coding | downstream | 437277 | 76210034 ~ 76283177 (-) |
| cdk20 | cdk20 | coding | downstream | 522488 | 76179039 ~ 76197966 (-) |
| hdac6 | hdac6 | coding | downstream | 551083 | 76127987 ~ 76169371 (-) |
| LOC110531297 | tkt | coding | upstream | 489730 | 77210420 ~ 77227773 (-) |
| lrrc23 | lrrc23 | coding | upstream | 518140 | 77238830 ~ 77253709 (-) |
| LOC110532861 | LOC105006798 | coding | upstream | 546671 | 77267361 ~ 77355158 (-) |
| LOC110529252 | LOC106592002 | coding | upstream | 637338 | 77358028 ~ 77368083 (-) |
| LOC110531295 | LOC106572974 | coding | upstream | 733782 | 77454472 ~ 77544388 (-) |
| G842310 | NA | non-coding | downstream | 172 | 76719286 ~ 76720282 (-) |
| G842311 | LOC106572956 | non-coding | downstream | 2437 | 76717254 ~ 76718017 (-) |
| G842308 | LOC106572956 | non-coding | downstream | 4635 | 76715509 ~ 76715819 (-) |
| G842306 | NA | non-coding | downstream | 6509 | 76713733 ~ 76713945 (-) |
| G842302 | LOC106572956 | non-coding | downstream | 11134 | 76708902 ~ 76709320 (-) |
| G842314 | NA | non-coding | upstream | 11667 | 76732357 ~ 76732620 (-) |
| G842317 | NA | non-coding | upstream | 22340 | 76743030 ~ 76743276 (-) |
| G842318 | NA | non-coding | upstream | 23133 | 76743823 ~ 76755142 (-) |
| G842319 | NA | non-coding | upstream | 24911 | 76745601 ~ 76753605 (-) |
| G842320 | NA | non-coding | upstream | 31576 | 76752266 ~ 76754217 (-) |
| G842232 | aprin | other | downstream | 84818 | 76625619 ~ 76635636 (-) |
| G842035 | LOC106572932 | other | downstream | 690522 | 76023343 ~ 76029932 (-) |
| G841224 | NA | other | downstream | 1056174 | 75659713 ~ 75664280 (-) |
| LOC110531287 | LOC106572946 | other | downstream | 1214976 | 75421476 ~ 75625131 (-) |
| G842335 | NA | other | upstream | 135767 | 76856457 ~ 76859965 (-) |
| G842449 | NA | other | upstream | 321899 | 77042589 ~ 77043395 (-) |
| G842543 | NA | other | upstream | 644329 | 77365019 ~ 77365360 (-) |
| G842858 | NA | other | upstream | 1043411 | 77764101 ~ 77764737 (-) |
